Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL354719.1-201ENST00000406535 843 ntBASIC3.86□□□□□ -1.79
TOP2AP11388 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.86□□□□□ -1.79
TOP2AP11388 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.86□□□□□ -1.79
TOP2AP11388 AC009969.1-201ENST00000438726 172 ntBASIC3.86□□□□□ -1.79
TOP2AP11388 AC004263.1-201ENST00000479327 332 ntBASIC3.86□□□□□ -1.79
TOP2AP11388 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TOP2AP11388 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.86□□□□□ -1.79
TOP2AP11388 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TOP2AP11388 MTND5P27-201ENST00000428871 1720 ntBASIC3.86□□□□□ -1.79
TOP2AP11388 MUPP-201ENST00000438111 566 ntBASIC3.85□□□□□ -1.79
TOP2AP11388 RPL7P52-201ENST00000449200 742 ntBASIC3.85□□□□□ -1.79
TOP2AP11388 AC021733.2-201ENST00000518830 497 ntBASIC3.85□□□□□ -1.79
TOP2AP11388 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP2AP11388 MTCYBP28-201ENST00000566728 1132 ntBASIC3.85□□□□□ -1.79
TOP2AP11388 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP2AP11388 VN1R9P-201ENST00000614184 867 ntBASIC3.85□□□□□ -1.79
TOP2AP11388 AC010733.2-201ENST00000589496 5702 ntBASIC3.85□□□□□ -1.79
TOP2AP11388 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP2AP11388 MTND5P29-201ENST00000458676 1807 ntBASIC3.85□□□□□ -1.79
TOP2AP11388 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TOP2AP11388 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TOP2AP11388 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TOP2AP11388 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TOP2AP11388 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.85□□□□□ -1.79
TOP2AP11388 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TOP2AP11388 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP2AP11388 POU5F1P7-201ENST00000508759 541 ntBASIC3.85□□□□□ -1.79
TOP2AP11388 Y_RNA.673-201ENST00000516306 88 ntBASIC3.85□□□□□ -1.79
TOP2AP11388 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP2AP11388 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.85□□□□□ -1.79
TOP2AP11388 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.85□□□□□ -1.79
TOP2AP11388 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.85□□□□□ -1.79
TOP2AP11388 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.85□□□□□ -1.79
TOP2AP11388 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TOP2AP11388 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.84□□□□□ -1.79
TOP2AP11388 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TOP2AP11388 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TOP2AP11388 AL356292.1-201ENST00000283110 373 ntBASIC3.84□□□□□ -1.8
TOP2AP11388 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TOP2AP11388 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.84□□□□□ -1.8
TOP2AP11388 VTA1P1-201ENST00000414044 866 ntBASIC3.84□□□□□ -1.8
TOP2AP11388 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TOP2AP11388 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.84□□□□□ -1.8
TOP2AP11388 Y_RNA.676-201ENST00000516393 96 ntBASIC3.84□□□□□ -1.8
TOP2AP11388 RNU6-548P-201ENST00000517083 115 ntBASIC3.84□□□□□ -1.8
TOP2AP11388 AK6P1-201ENST00000540219 478 ntBASIC3.84□□□□□ -1.8
TOP2AP11388 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.84□□□□□ -1.8
TOP2AP11388 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.84□□□□□ -1.8
TOP2AP11388 AL845331.3-202ENST00000562856 261 ntBASIC3.84□□□□□ -1.8
TOP2AP11388 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.84□□□□□ -1.8
TOP2AP11388 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.84□□□□□ -1.8
TOP2AP11388 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TOP2AP11388 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP2AP11388 AC066616.2-201ENST00000559334 1481 ntBASIC3.83□□□□□ -1.8
TOP2AP11388 GABPAP-201ENST00000419271 1356 ntBASIC3.83□□□□□ -1.8
TOP2AP11388 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP2AP11388 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP2AP11388 OR5H15-201ENST00000383696 930 ntBASIC3.83□□□□□ -1.8
TOP2AP11388 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP2AP11388 SDCBPP3-201ENST00000419629 891 ntBASIC3.83□□□□□ -1.8
TOP2AP11388 AL390023.1-201ENST00000428836 262 ntBASIC3.83□□□□□ -1.8
TOP2AP11388 AC116337.1-201ENST00000509680 687 ntBASIC3.83□□□□□ -1.8
TOP2AP11388 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP2AP11388 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP2AP11388 AL451074.6-201ENST00000608512 729 ntBASIC3.83□□□□□ -1.8
TOP2AP11388 AC091564.4-201ENST00000533934 2194 ntBASIC3.83□□□□□ -1.8
TOP2AP11388 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
TOP2AP11388 AL133412.1-201ENST00000380194 2992 ntBASIC3.83□□□□□ -1.8
TOP2AP11388 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TOP2AP11388 ZNF542P-204ENST00000482727 1305 ntBASIC3.82□□□□□ -1.8
TOP2AP11388 HSPA8P4-201ENST00000511877 1920 ntBASIC3.82□□□□□ -1.8
TOP2AP11388 RN7SKP44-201ENST00000363602 316 ntBASIC3.82□□□□□ -1.8
TOP2AP11388 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP2AP11388 TRGV5P-201ENST00000419915 354 ntBASIC3.82□□□□□ -1.8
TOP2AP11388 AL031736.2-201ENST00000426573 787 ntBASIC3.82□□□□□ -1.8
TOP2AP11388 RPL36AP6-201ENST00000435770 321 ntBASIC3.82□□□□□ -1.8
TOP2AP11388 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.82□□□□□ -1.8
TOP2AP11388 AC026412.2-201ENST00000512270 1075 ntBASIC3.82□□□□□ -1.8
TOP2AP11388 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP2AP11388 AC078814.3-201ENST00000553036 491 ntBASIC3.82□□□□□ -1.8
TOP2AP11388 HMGB3P26-201ENST00000560051 582 ntBASIC3.82□□□□□ -1.8
TOP2AP11388 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.82□□□□□ -1.8
TOP2AP11388 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOP2AP11388 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP2AP11388 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TOP2AP11388 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TOP2AP11388 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TOP2AP11388 MTCO3P31-201ENST00000405526 789 ntBASIC3.81□□□□□ -1.8
TOP2AP11388 SNORA11.4-201ENST00000408823 129 ntBASIC3.81□□□□□ -1.8
TOP2AP11388 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP2AP11388 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP2AP11388 RPL31P45-201ENST00000419532 356 ntBASIC3.81□□□□□ -1.8
TOP2AP11388 CKS1BP2-201ENST00000497342 240 ntBASIC3.81□□□□□ -1.8
TOP2AP11388 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP2AP11388 MIR6715B-201ENST00000637172 77 ntBASIC3.81□□□□□ -1.8
TOP2AP11388 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TOP2AP11388 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TOP2AP11388 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP2AP11388 U8.8-201ENST00000365399 135 ntBASIC3.8□□□□□ -1.8
TOP2AP11388 SNORA67.3-201ENST00000384366 140 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms