Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RHOP08100 RNA5SP73-201ENST00000516744 108 ntBASIC4.48□□□□□ -1.69
RHOP08100 AC104986.1-201ENST00000517978 436 ntBASIC4.48□□□□□ -1.69
RHOP08100 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.48□□□□□ -1.69
RHOP08100 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.48□□□□□ -1.69
RHOP08100 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.48□□□□□ -1.69
RHOP08100 MIR3913-1-201ENST00000577744 102 ntBASIC4.48□□□□□ -1.69
RHOP08100 AP001180.3-201ENST00000582221 145 ntBASIC4.48□□□□□ -1.69
RHOP08100 NF1P5-201ENST00000588287 448 ntBASIC4.48□□□□□ -1.69
RHOP08100 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.48□□□□□ -1.69
RHOP08100 IMMP1LP1-201ENST00000605170 488 ntBASIC4.48□□□□□ -1.69
RHOP08100 RNU4-89P-201ENST00000607443 133 ntBASIC4.48□□□□□ -1.69
RHOP08100 MIR92B-201ENST00000607575 96 ntBASIC4.48□□□□□ -1.69
RHOP08100 AC004067.1-201ENST00000608733 700 ntBASIC4.48□□□□□ -1.69
RHOP08100 AC007546.1-201ENST00000619452 559 ntBASIC4.48□□□□□ -1.69
RHOP08100 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.48□□□□□ -1.69
RHOP08100 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RHOP08100 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHOP08100 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.48□□□□□ -1.69
RHOP08100 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RHOP08100 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHOP08100 AL672167.1-205ENST00000641112 3080 ntBASIC4.48□□□□□ -1.69
RHOP08100 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RHOP08100 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.48□□□□□ -1.69
RHOP08100 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RHOP08100 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RHOP08100 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RHOP08100 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RHOP08100 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RHOP08100 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
RHOP08100 RNA5SP307-201ENST00000362863 116 ntBASIC4.47□□□□□ -1.69
RHOP08100 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.47□□□□□ -1.69
RHOP08100 RNU6-533P-201ENST00000384144 107 ntBASIC4.47□□□□□ -1.69
RHOP08100 MIR649-201ENST00000384843 97 ntBASIC4.47□□□□□ -1.69
RHOP08100 SNORD115.1-201ENST00000391109 76 ntBASIC4.47□□□□□ -1.69
RHOP08100 Y_RNA.608-201ENST00000410647 95 ntBASIC4.47□□□□□ -1.69
RHOP08100 SNORA74C-2-201ENST00000411179 201 ntBASIC4.47□□□□□ -1.69
RHOP08100 AC007742.1-201ENST00000425789 329 ntBASIC4.47□□□□□ -1.69
RHOP08100 DPPA2P1-201ENST00000428060 556 ntBASIC4.47□□□□□ -1.69
RHOP08100 CEACAMP1-201ENST00000434624 1035 ntBASIC4.47□□□□□ -1.69
RHOP08100 ELOCP26-201ENST00000436067 329 ntBASIC4.47□□□□□ -1.69
RHOP08100 RSU1P2-202ENST00000437884 485 ntBASIC4.47□□□□□ -1.69
RHOP08100 LSM1P1-201ENST00000438629 273 ntBASIC4.47□□□□□ -1.69
RHOP08100 AC073614.1-201ENST00000438690 650 ntBASIC4.47□□□□□ -1.69
RHOP08100 RPL23AP16-201ENST00000441715 421 ntBASIC4.47□□□□□ -1.69
RHOP08100 RPS26P56-201ENST00000444468 240 ntBASIC4.47□□□□□ -1.69
RHOP08100 GEMIN8P3-201ENST00000445417 720 ntBASIC4.47□□□□□ -1.69
RHOP08100 PSPHP1-201ENST00000450062 261 ntBASIC4.47□□□□□ -1.69
RHOP08100 AL590365.1-201ENST00000450788 243 ntBASIC4.47□□□□□ -1.69
RHOP08100 RPL23AP81-201ENST00000455252 467 ntBASIC4.47□□□□□ -1.69
RHOP08100 OR6K1P-201ENST00000456766 971 ntBASIC4.47□□□□□ -1.69
RHOP08100 RPL7P22-201ENST00000466005 733 ntBASIC4.47□□□□□ -1.69
RHOP08100 AL121769.1-201ENST00000469473 401 ntBASIC4.47□□□□□ -1.69
RHOP08100 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.47□□□□□ -1.69
RHOP08100 AC017015.1-201ENST00000477387 286 ntBASIC4.47□□□□□ -1.69
RHOP08100 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.47□□□□□ -1.69
RHOP08100 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.47□□□□□ -1.69
RHOP08100 TMEM251P1-201ENST00000503717 318 ntBASIC4.47□□□□□ -1.69
RHOP08100 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RHOP08100 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RHOP08100 AC108078.1-201ENST00000508073 725 ntBASIC4.47□□□□□ -1.69
RHOP08100 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RHOP08100 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.47□□□□□ -1.69
RHOP08100 RNU6-314P-201ENST00000516574 104 ntBASIC4.47□□□□□ -1.69
RHOP08100 HMGB1P19-201ENST00000517578 577 ntBASIC4.47□□□□□ -1.69
RHOP08100 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.47□□□□□ -1.69
RHOP08100 HSPA8P13-201ENST00000523715 472 ntBASIC4.47□□□□□ -1.69
RHOP08100 MTND4LP18-201ENST00000526864 291 ntBASIC4.47□□□□□ -1.69
RHOP08100 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.47□□□□□ -1.69
RHOP08100 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.47□□□□□ -1.69
RHOP08100 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.47□□□□□ -1.69
RHOP08100 MIR4286-201ENST00000580651 93 ntBASIC4.47□□□□□ -1.69
RHOP08100 MIR4512-201ENST00000583257 77 ntBASIC4.47□□□□□ -1.69
RHOP08100 RN7SL435P-201ENST00000584418 282 ntBASIC4.47□□□□□ -1.69
RHOP08100 AC009977.1-201ENST00000586015 570 ntBASIC4.47□□□□□ -1.69
RHOP08100 AC245389.1-201ENST00000605141 529 ntBASIC4.47□□□□□ -1.69
RHOP08100 Z98200.1-201ENST00000607298 470 ntBASIC4.47□□□□□ -1.69
RHOP08100 AL592295.2-201ENST00000612578 206 ntBASIC4.47□□□□□ -1.69
RHOP08100 AC007014.2-201ENST00000615581 479 ntBASIC4.47□□□□□ -1.69
RHOP08100 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
RHOP08100 AC022106.2-201ENST00000620114 757 ntBASIC4.47□□□□□ -1.69
RHOP08100 AC007546.2-201ENST00000623996 360 ntBASIC4.47□□□□□ -1.69
RHOP08100 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RHOP08100 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RHOP08100 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RHOP08100 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.47□□□□□ -1.69
RHOP08100 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.46□□□□□ -1.69
RHOP08100 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RHOP08100 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.46□□□□□ -1.69
RHOP08100 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.46□□□□□ -1.69
RHOP08100 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.46□□□□□ -1.7
RHOP08100 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
RHOP08100 RLIMP1-201ENST00000339626 1680 ntBASIC4.46□□□□□ -1.7
RHOP08100 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
RHOP08100 RPL23AP57-201ENST00000332361 466 ntBASIC4.46□□□□□ -1.7
RHOP08100 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.46□□□□□ -1.7
RHOP08100 RNU6-441P-201ENST00000384545 106 ntBASIC4.46□□□□□ -1.7
RHOP08100 DSTNP4-201ENST00000399472 474 ntBASIC4.46□□□□□ -1.7
RHOP08100 RPL21P65-201ENST00000406094 466 ntBASIC4.46□□□□□ -1.7
RHOP08100 MIR320C1-201ENST00000408566 88 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms