Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 DNM1P47-203ENST00000571780 12667 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 AC005332.5-201ENST00000591222 2919 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFAP04085 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 RNU105B-201ENST00000364478 208 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 Y_RNA.452-201ENST00000384202 108 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 RNU6-171P-201ENST00000384354 107 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 AC013442.1-201ENST00000397347 228 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 MRPL42P3-201ENST00000401492 326 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 MCFD2P1-201ENST00000417812 300 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 AC018865.2-201ENST00000423631 129 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 RPS27AP12-201ENST00000429552 465 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 HMGB3P24-201ENST00000433260 622 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFAP04085 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFAP04085 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFAP04085 RPL23AP33-201ENST00000442301 452 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 GAPDHP27-201ENST00000447427 1020 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 TPT1P13-201ENST00000449760 499 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFAP04085 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFAP04085 RPS23P6-201ENST00000466136 431 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFAP04085 AC116337.1-201ENST00000509680 687 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 MTCO2P24-201ENST00000515611 426 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 SNORA25.10-201ENST00000515926 124 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFAP04085 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFAP04085 AC023442.1-201ENST00000531247 422 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFAP04085 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFAP04085 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFAP04085 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFAP04085 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFAP04085 MIR5692C1-201ENST00000585309 91 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 FAM157A-202ENST00000615155 405 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFAP04085 PLCE1P1-201ENST00000622094 305 ntBASIC5.5□□□□□ -1.53
PDGFAP04085 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFAP04085 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFAP04085 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFAP04085 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFAP04085 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFAP04085 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PDGFAP04085 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFAP04085 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFAP04085 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.49□□□□□ -1.53
PDGFAP04085 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFAP04085 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFAP04085 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFAP04085 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFAP04085 RNA5SP46-201ENST00000362370 120 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 SNORA16.2-201ENST00000390991 127 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 NDUFS5P1-201ENST00000405668 289 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 RPS23P10-201ENST00000416185 486 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 AC016712.1-201ENST00000431088 378 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 RPL12P18-201ENST00000437175 325 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFAP04085 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFAP04085 EEF1B2P6-201ENST00000445713 673 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.49□□□□□ -1.53
PDGFAP04085 RPL37P6-202ENST00000464216 403 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFAP04085 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.49□□□□□ -1.53
PDGFAP04085 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFAP04085 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFAP04085 RNU6-1069P-201ENST00000516612 133 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 Y_RNA.708-201ENST00000516950 96 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 IGHV1-14-201ENST00000523391 241 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 RPA2P3-201ENST00000533268 770 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
PDGFAP04085 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.49□□□□□ -1.53
PDGFAP04085 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.49□□□□□ -1.53
PDGFAP04085 AC010653.1-201ENST00000571108 881 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 MIR1269B-201ENST00000580405 75 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFAP04085 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFAP04085 AC174048.1-201ENST00000603389 144 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 AC006363.1-201ENST00000603806 463 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 AL359547.2-201ENST00000615810 418 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 MIR6730-201ENST00000622213 67 ntBASIC5.49□□□□□ -1.53
PDGFAP04085 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFAP04085 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFAP04085 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFAP04085 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PDGFAP04085 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms