Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MIR1276-201ENST00000408707 83 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 MTCO2P17-201ENST00000424336 677 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC2.17□□□□□ -2.06
SPTA1P02549 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.17□□□□□ -2.06
SPTA1P02549 AC021269.2-201ENST00000532318 330 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.17□□□□□ -2.06
SPTA1P02549 CRYM-AS1-204ENST00000637983 556 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 AP000526.1-201ENST00000603308 1388 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SPTA1P02549 AC026241.1-201ENST00000517873 2142 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.17□□□□□ -2.06
SPTA1P02549 LUZP4P1-201ENST00000415420 344 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 AL451074.3-201ENST00000437709 472 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 AL589765.3-201ENST00000446084 462 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 AL365503.1-201ENST00000605247 905 ntBASIC2.17□□□□□ -2.06
SPTA1P02549 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SPTA1P02549 MTND4P10-201ENST00000446199 1363 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SPTA1P02549 Y_RNA.178-201ENST00000363832 102 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 AMD1P2-201ENST00000412936 992 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 RPL5P13-201ENST00000462840 709 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 IGLVIV-53-201ENST00000520107 367 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.16□□□□□ -2.06
SPTA1P02549 BMS1P7-201ENST00000602440 1052 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 AC095038.3-201ENST00000634439 195 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.16□□□□□ -2.06
SPTA1P02549 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SPTA1P02549 RNU1-91P-201ENST00000364746 163 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 Y_RNA.295-201ENST00000364918 102 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.16□□□□□ -2.06
SPTA1P02549 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.16□□□□□ -2.06
SPTA1P02549 AK6P1-201ENST00000540219 478 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 AL354943.1-201ENST00000572103 781 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 AC002984.1-201ENST00000591692 448 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 AC126118.1-201ENST00000607744 628 ntBASIC2.16□□□□□ -2.06
SPTA1P02549 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.15□□□□□ -2.06
SPTA1P02549 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.06
SPTA1P02549 RNY1-201ENST00000364228 113 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.15□□□□□ -2.07
SPTA1P02549 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SPTA1P02549 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.15□□□□□ -2.07
SPTA1P02549 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTA1P02549 KCTD9P5-201ENST00000504141 1170 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 SNORA31.1-201ENST00000515993 133 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 SNORA31.5-201ENST00000516190 133 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.15□□□□□ -2.07
SPTA1P02549 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SPTA1P02549 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.15□□□□□ -2.07
SPTA1P02549 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.15□□□□□ -2.07
SPTA1P02549 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.15□□□□□ -2.07
SPTA1P02549 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SPTA1P02549 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
SPTA1P02549 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SPTA1P02549 AL512646.1-201ENST00000269395 1077 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
SPTA1P02549 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTA1P02549 AL162578.1-201ENST00000406202 378 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 MTND5P19-201ENST00000424872 1794 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 AC105402.2-201ENST00000438503 358 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.15□□□□□ -2.07
SPTA1P02549 ATP5J2P3-201ENST00000451550 258 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 RPL23AP49-201ENST00000492925 468 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 AC104090.1-201ENST00000506341 1171 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTA1P02549 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTA1P02549 SNRPGP18-201ENST00000553000 214 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTA1P02549 LINC00216-201ENST00000623548 1126 ntBASIC2.15□□□□□ -2.07
SPTA1P02549 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SPTA1P02549 AC004925.1-201ENST00000624256 2706 ntBASIC2.14□□□□□ -2.07
SPTA1P02549 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SPTA1P02549 Y_RNA.191-201ENST00000363972 113 ntBASIC2.14□□□□□ -2.07
SPTA1P02549 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.14□□□□□ -2.07
SPTA1P02549 HMGB1P10-201ENST00000395823 563 ntBASIC2.14□□□□□ -2.07
SPTA1P02549 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.14□□□□□ -2.07
SPTA1P02549 AL450263.2-201ENST00000439400 589 ntBASIC2.14□□□□□ -2.07
SPTA1P02549 RPL23AP76-201ENST00000441860 458 ntBASIC2.14□□□□□ -2.07
SPTA1P02549 AL591719.1-201ENST00000444669 744 ntBASIC2.14□□□□□ -2.07
SPTA1P02549 NIPA2P2-201ENST00000496376 1083 ntBASIC2.14□□□□□ -2.07
SPTA1P02549 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.14□□□□□ -2.07
SPTA1P02549 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.14□□□□□ -2.07
SPTA1P02549 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.14□□□□□ -2.07
SPTA1P02549 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SPTA1P02549 RNA5SP502-201ENST00000362694 119 ntBASIC2.13□□□□□ -2.07
SPTA1P02549 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SPTA1P02549 RPL31P1-201ENST00000398116 372 ntBASIC2.13□□□□□ -2.07
SPTA1P02549 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.13□□□□□ -2.07
SPTA1P02549 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SPTA1P02549 AL035551.1-201ENST00000446931 348 ntBASIC2.13□□□□□ -2.07
SPTA1P02549 RPL21P41-201ENST00000459863 264 ntBASIC2.13□□□□□ -2.07
SPTA1P02549 AC021146.5-201ENST00000503544 545 ntBASIC2.13□□□□□ -2.07
SPTA1P02549 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SPTA1P02549 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.13□□□□□ -2.07
SPTA1P02549 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.13□□□□□ -2.07
SPTA1P02549 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.13□□□□□ -2.07
SPTA1P02549 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SPTA1P02549 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SPTA1P02549 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SPTA1P02549 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.13□□□□□ -2.07
SPTA1P02549 AL355379.1-201ENST00000405542 640 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms