Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RNA5SP344-201ENST00000411081 104 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 AL096701.2-201ENST00000416920 238 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.5□□□□□ -1.85
POLR1AO95602 RPL7P52-201ENST00000449200 742 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 RPL23AP62-201ENST00000463396 453 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 AC008571.1-201ENST00000467232 300 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 RPL23AP45-201ENST00000476406 468 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.5□□□□□ -1.85
POLR1AO95602 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.5□□□□□ -1.85
POLR1AO95602 RPL23AP84-201ENST00000571193 464 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.5□□□□□ -1.85
POLR1AO95602 AC099778.2-201ENST00000610904 211 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 AC104237.2-201ENST00000612456 443 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 AL353997.5-201ENST00000618886 171 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.5□□□□□ -1.85
POLR1AO95602 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.5□□□□□ -1.85
POLR1AO95602 YWHAZP7-201ENST00000436906 631 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 OR5BN1P-201ENST00000532955 829 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 HMGB3P26-201ENST00000560051 582 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.5□□□□□ -1.85
POLR1AO95602 MIR4498-201ENST00000577599 66 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
POLR1AO95602 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
POLR1AO95602 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.49□□□□□ -1.85
POLR1AO95602 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.49□□□□□ -1.85
POLR1AO95602 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
POLR1AO95602 AP000926.3-201ENST00000497201 299 ntBASIC3.49□□□□□ -1.85
POLR1AO95602 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.49□□□□□ -1.85
POLR1AO95602 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.49□□□□□ -1.85
POLR1AO95602 CKS1BP1-201ENST00000555221 240 ntBASIC3.49□□□□□ -1.85
POLR1AO95602 VN1R9P-201ENST00000614184 867 ntBASIC3.49□□□□□ -1.85
POLR1AO95602 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
POLR1AO95602 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
POLR1AO95602 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1AO95602 MTND5P6-201ENST00000422338 1798 ntBASIC3.48□□□□□ -1.85
POLR1AO95602 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
POLR1AO95602 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
POLR1AO95602 AC013410.1-201ENST00000436223 1232 ntBASIC3.48□□□□□ -1.85
POLR1AO95602 Z99127.2-201ENST00000441426 334 ntBASIC3.48□□□□□ -1.85
POLR1AO95602 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1AO95602 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.48□□□□□ -1.85
POLR1AO95602 WWP1P1-201ENST00000466609 2769 ntBASIC3.48□□□□□ -1.85
POLR1AO95602 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1AO95602 RANP7-201ENST00000418085 644 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 SNORA31.1-201ENST00000515993 133 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 SNORA31.5-201ENST00000516190 133 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1AO95602 AC123904.3-201ENST00000547218 814 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 AC074029.1-201ENST00000552531 1044 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1AO95602 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.47□□□□□ -1.85
POLR1AO95602 AL137847.3-201ENST00000611521 109 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 MIR8070-201ENST00000616510 88 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1AO95602 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1AO95602 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1AO95602 SNORA80E-201ENST00000384744 137 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1AO95602 PDCD5P1-201ENST00000543528 309 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 MTCYBP28-201ENST00000566728 1132 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 NF1P5-201ENST00000588287 448 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 AL645944.1-201ENST00000603857 493 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 AC046143.2-201ENST00000609789 160 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 MIR6715B-201ENST00000637172 77 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 PNPT1P2-201ENST00000456768 2050 ntBASIC3.47□□□□□ -1.85
POLR1AO95602 Y_RNA.338-201ENST00000365320 114 ntBASIC3.46□□□□□ -1.86
POLR1AO95602 U8.9-201ENST00000365667 134 ntBASIC3.46□□□□□ -1.86
POLR1AO95602 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1AO95602 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1AO95602 EIF5P1-201ENST00000400019 1231 ntBASIC3.46□□□□□ -1.86
POLR1AO95602 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.46□□□□□ -1.86
POLR1AO95602 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.46□□□□□ -1.86
POLR1AO95602 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.46□□□□□ -1.86
POLR1AO95602 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1AO95602 AC104090.1-201ENST00000506341 1171 ntBASIC3.46□□□□□ -1.86
POLR1AO95602 AC116337.1-201ENST00000509680 687 ntBASIC3.46□□□□□ -1.86
POLR1AO95602 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1AO95602 RNA5SP281-201ENST00000516504 135 ntBASIC3.46□□□□□ -1.86
POLR1AO95602 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.46□□□□□ -1.86
POLR1AO95602 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
POLR1AO95602 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
POLR1AO95602 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
POLR1AO95602 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
POLR1AO95602 SNORA64-201ENST00000384674 134 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 AC104389.3-201ENST00000445629 235 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 AC009961.3-201ENST00000449832 765 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 AL049830.2-201ENST00000480072 201 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 RPL23AP70-201ENST00000483361 460 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 LINC00888-204ENST00000487386 421 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 AC106872.3-201ENST00000495104 446 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 ACTR6P1-201ENST00000514311 1104 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 RNU6-826P-201ENST00000516827 104 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 CKS1BP7-201ENST00000522230 235 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 AC074140.1-201ENST00000621617 208 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
POLR1AO95602 AC069528.2-201ENST00000624849 1991 ntBASIC3.45□□□□□ -1.86
POLR1AO95602 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
POLR1AO95602 SNORA17.3-201ENST00000391159 129 ntBASIC3.44□□□□□ -1.86
POLR1AO95602 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.44□□□□□ -1.86
POLR1AO95602 Z98742.2-201ENST00000431564 187 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms