Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 RPL7P8-201ENST00000411964 730 ntBASIC2.97□□□□□ -1.93
VAPBO95292 AL389915.1-201ENST00000422463 466 ntBASIC2.97□□□□□ -1.93
VAPBO95292 RPL21P40-201ENST00000428586 483 ntBASIC2.97□□□□□ -1.93
VAPBO95292 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.97□□□□□ -1.93
VAPBO95292 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.97□□□□□ -1.93
VAPBO95292 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.97□□□□□ -1.93
VAPBO95292 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.97□□□□□ -1.93
VAPBO95292 BX510359.1-201ENST00000456973 237 ntBASIC2.97□□□□□ -1.93
VAPBO95292 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.97□□□□□ -1.93
VAPBO95292 AC010301.1-201ENST00000473936 355 ntBASIC2.97□□□□□ -1.93
VAPBO95292 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VAPBO95292 SNORA26.10-201ENST00000516427 141 ntBASIC2.97□□□□□ -1.93
VAPBO95292 SNORD59.2-201ENST00000516873 68 ntBASIC2.97□□□□□ -1.93
VAPBO95292 OR4A45P-201ENST00000529954 901 ntBASIC2.97□□□□□ -1.93
VAPBO95292 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.97□□□□□ -1.93
VAPBO95292 ATP5F1P7-201ENST00000567330 760 ntBASIC2.97□□□□□ -1.93
VAPBO95292 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.97□□□□□ -1.93
VAPBO95292 AC053481.3-201ENST00000577881 843 ntBASIC2.97□□□□□ -1.93
VAPBO95292 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.97□□□□□ -1.93
VAPBO95292 AC012254.4-201ENST00000588843 273 ntBASIC2.97□□□□□ -1.93
VAPBO95292 AL133393.1-201ENST00000603277 287 ntBASIC2.97□□□□□ -1.93
VAPBO95292 SRGNP1-201ENST00000603392 451 ntBASIC2.97□□□□□ -1.93
VAPBO95292 AC025588.3-201ENST00000604182 274 ntBASIC2.97□□□□□ -1.93
VAPBO95292 AC135178.6-201ENST00000605314 398 ntBASIC2.97□□□□□ -1.93
VAPBO95292 YPEL5P2-201ENST00000605553 359 ntBASIC2.97□□□□□ -1.93
VAPBO95292 HSPE1P14-201ENST00000605812 302 ntBASIC2.97□□□□□ -1.93
VAPBO95292 AL162233.1-201ENST00000620014 944 ntBASIC2.97□□□□□ -1.93
VAPBO95292 AC097372.4-201ENST00000625025 466 ntBASIC2.97□□□□□ -1.93
VAPBO95292 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.97□□□□□ -1.93
VAPBO95292 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VAPBO95292 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.97□□□□□ -1.93
VAPBO95292 MTND5P1-201ENST00000445440 1375 ntBASIC2.97□□□□□ -1.93
VAPBO95292 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.97□□□□□ -1.93
VAPBO95292 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VAPBO95292 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
VAPBO95292 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VAPBO95292 SNORA71.1-201ENST00000364523 117 ntBASIC2.96□□□□□ -1.94
VAPBO95292 RNU6-339P-201ENST00000384310 107 ntBASIC2.96□□□□□ -1.94
VAPBO95292 MIR23B-201ENST00000384832 97 ntBASIC2.96□□□□□ -1.94
VAPBO95292 MIR181B1-201ENST00000385240 110 ntBASIC2.96□□□□□ -1.94
VAPBO95292 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
VAPBO95292 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
VAPBO95292 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VAPBO95292 RPS3AP26-201ENST00000398259 784 ntBASIC2.96□□□□□ -1.94
VAPBO95292 U3.42-201ENST00000408746 214 ntBASIC2.96□□□□□ -1.94
VAPBO95292 PNRC2P1-201ENST00000423940 420 ntBASIC2.96□□□□□ -1.94
VAPBO95292 AL390023.1-201ENST00000428836 262 ntBASIC2.96□□□□□ -1.94
VAPBO95292 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.96□□□□□ -1.94
VAPBO95292 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.96□□□□□ -1.94
VAPBO95292 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.96□□□□□ -1.94
VAPBO95292 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.96□□□□□ -1.94
VAPBO95292 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.96□□□□□ -1.94
VAPBO95292 RPS29P2-201ENST00000479278 136 ntBASIC2.96□□□□□ -1.94
VAPBO95292 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VAPBO95292 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPBO95292 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPBO95292 MTCYBP37-201ENST00000510642 1133 ntBASIC2.96□□□□□ -1.94
VAPBO95292 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPBO95292 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.96□□□□□ -1.94
VAPBO95292 AC009812.2-201ENST00000517657 457 ntBASIC2.96□□□□□ -1.94
VAPBO95292 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.96□□□□□ -1.94
VAPBO95292 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.96□□□□□ -1.94
VAPBO95292 AC007536.1-201ENST00000533382 349 ntBASIC2.96□□□□□ -1.94
VAPBO95292 AC093014.1-201ENST00000548926 724 ntBASIC2.96□□□□□ -1.94
VAPBO95292 MTCO3P24-201ENST00000572729 782 ntBASIC2.96□□□□□ -1.94
VAPBO95292 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.96□□□□□ -1.94
VAPBO95292 AC083760.1-201ENST00000589621 670 ntBASIC2.96□□□□□ -1.94
VAPBO95292 AC128687.1-201ENST00000605304 619 ntBASIC2.96□□□□□ -1.94
VAPBO95292 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.96□□□□□ -1.94
VAPBO95292 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.96□□□□□ -1.94
VAPBO95292 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
VAPBO95292 MTND5P7-201ENST00000413558 1798 ntBASIC2.96□□□□□ -1.94
VAPBO95292 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VAPBO95292 MTND5P11-201ENST00000511037 1812 ntBASIC2.96□□□□□ -1.94
VAPBO95292 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
VAPBO95292 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VAPBO95292 RNA5SP258-201ENST00000362750 119 ntBASIC2.95□□□□□ -1.94
VAPBO95292 AC083799.1-201ENST00000366451 910 ntBASIC2.95□□□□□ -1.94
VAPBO95292 RNU6-761P-201ENST00000384148 107 ntBASIC2.95□□□□□ -1.94
VAPBO95292 ATP5F1P6-201ENST00000402768 767 ntBASIC2.95□□□□□ -1.94
VAPBO95292 YPEL5P1-201ENST00000419731 367 ntBASIC2.95□□□□□ -1.94
VAPBO95292 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.95□□□□□ -1.94
VAPBO95292 AC073310.1-201ENST00000423226 1033 ntBASIC2.95□□□□□ -1.94
VAPBO95292 AC093422.3-201ENST00000428506 305 ntBASIC2.95□□□□□ -1.94
VAPBO95292 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.95□□□□□ -1.94
VAPBO95292 SNRPEP4-201ENST00000435815 279 ntBASIC2.95□□□□□ -1.94
VAPBO95292 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.95□□□□□ -1.94
VAPBO95292 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.95□□□□□ -1.94
VAPBO95292 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.95□□□□□ -1.94
VAPBO95292 AC140076.1-201ENST00000449897 361 ntBASIC2.95□□□□□ -1.94
VAPBO95292 HMGN3P1-201ENST00000453847 193 ntBASIC2.95□□□□□ -1.94
VAPBO95292 BX248409.1-201ENST00000455497 255 ntBASIC2.95□□□□□ -1.94
VAPBO95292 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.95□□□□□ -1.94
VAPBO95292 AC068724.1-201ENST00000487100 792 ntBASIC2.95□□□□□ -1.94
VAPBO95292 OR2A20P-203ENST00000498397 1268 ntBASIC2.95□□□□□ -1.94
VAPBO95292 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.95□□□□□ -1.94
VAPBO95292 OR5G4P-201ENST00000525251 760 ntBASIC2.95□□□□□ -1.94
VAPBO95292 PSMA2P1-201ENST00000526365 646 ntBASIC2.95□□□□□ -1.94
VAPBO95292 AL121603.1-201ENST00000553815 142 ntBASIC2.95□□□□□ -1.94
VAPBO95292 AC233266.2-201ENST00000567067 528 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms