Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.36□□□□□ -1.71
MBD4O95243 AL049780.3-201ENST00000624612 1583 ntBASIC4.36□□□□□ -1.71
MBD4O95243 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 AC004925.1-201ENST00000624256 2706 ntBASIC4.35□□□□□ -1.71
MBD4O95243 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.35□□□□□ -1.71
MBD4O95243 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 RNU6-629P-201ENST00000384061 103 ntBASIC4.35□□□□□ -1.71
MBD4O95243 MIR449B-201ENST00000384995 97 ntBASIC4.35□□□□□ -1.71
MBD4O95243 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
MBD4O95243 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.35□□□□□ -1.71
MBD4O95243 HSPE1P8-201ENST00000406997 288 ntBASIC4.35□□□□□ -1.71
MBD4O95243 RAD23BP2-201ENST00000416003 1207 ntBASIC4.35□□□□□ -1.71
MBD4O95243 TOMM22P1-201ENST00000418578 312 ntBASIC4.35□□□□□ -1.71
MBD4O95243 DBIP2-201ENST00000419076 262 ntBASIC4.35□□□□□ -1.71
MBD4O95243 AL139421.1-201ENST00000423010 169 ntBASIC4.35□□□□□ -1.71
MBD4O95243 COX7BP2-201ENST00000437976 242 ntBASIC4.35□□□□□ -1.71
MBD4O95243 AC010655.1-201ENST00000449336 292 ntBASIC4.35□□□□□ -1.71
MBD4O95243 RPS24P6-201ENST00000452670 400 ntBASIC4.35□□□□□ -1.71
MBD4O95243 AC073387.1-201ENST00000453261 709 ntBASIC4.35□□□□□ -1.71
MBD4O95243 USP9YP25-201ENST00000457708 443 ntBASIC4.35□□□□□ -1.71
MBD4O95243 HMGB1P25-201ENST00000468402 607 ntBASIC4.35□□□□□ -1.71
MBD4O95243 AC108729.1-201ENST00000487812 947 ntBASIC4.35□□□□□ -1.71
MBD4O95243 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.35□□□□□ -1.71
MBD4O95243 MTCYBP17-201ENST00000503579 789 ntBASIC4.35□□□□□ -1.71
MBD4O95243 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.35□□□□□ -1.71
MBD4O95243 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
MBD4O95243 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.35□□□□□ -1.71
MBD4O95243 XKRY-201ENST00000510392 1100 ntBASIC4.35□□□□□ -1.71
MBD4O95243 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.35□□□□□ -1.71
MBD4O95243 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.35□□□□□ -1.71
MBD4O95243 AC109635.4-202ENST00000531666 412 ntBASIC4.35□□□□□ -1.71
MBD4O95243 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.35□□□□□ -1.71
MBD4O95243 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.35□□□□□ -1.71
MBD4O95243 AC010198.2-201ENST00000550612 259 ntBASIC4.35□□□□□ -1.71
MBD4O95243 AL121603.1-201ENST00000553815 142 ntBASIC4.35□□□□□ -1.71
MBD4O95243 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.35□□□□□ -1.71
MBD4O95243 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.35□□□□□ -1.71
MBD4O95243 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.35□□□□□ -1.71
MBD4O95243 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.35□□□□□ -1.71
MBD4O95243 AC091057.2-201ENST00000602594 792 ntBASIC4.35□□□□□ -1.71
MBD4O95243 AC025588.4-201ENST00000615802 908 ntBASIC4.35□□□□□ -1.71
MBD4O95243 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 AC006386.1-201ENST00000619436 415 ntBASIC4.35□□□□□ -1.71
MBD4O95243 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.35□□□□□ -1.71
MBD4O95243 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.35□□□□□ -1.71
MBD4O95243 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MBD4O95243 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
MBD4O95243 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.34□□□□□ -1.71
MBD4O95243 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.34□□□□□ -1.71
MBD4O95243 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MBD4O95243 RNA5SP235-201ENST00000365411 114 ntBASIC4.34□□□□□ -1.71
MBD4O95243 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.34□□□□□ -1.71
MBD4O95243 MIR513B-201ENST00000385136 84 ntBASIC4.34□□□□□ -1.71
MBD4O95243 RPS3AP25-201ENST00000411660 793 ntBASIC4.34□□□□□ -1.71
MBD4O95243 RPS29P4-201ENST00000414733 161 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC093578.1-201ENST00000415219 368 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC019178.2-201ENST00000423595 505 ntBASIC4.34□□□□□ -1.71
MBD4O95243 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.34□□□□□ -1.71
MBD4O95243 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.34□□□□□ -1.71
MBD4O95243 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.34□□□□□ -1.71
MBD4O95243 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.34□□□□□ -1.71
MBD4O95243 PSMA6P3-201ENST00000428242 164 ntBASIC4.34□□□□□ -1.71
MBD4O95243 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.34□□□□□ -1.71
MBD4O95243 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.34□□□□□ -1.71
MBD4O95243 MTND2P19-201ENST00000449129 1012 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC099563.1-201ENST00000456086 418 ntBASIC4.34□□□□□ -1.71
MBD4O95243 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.34□□□□□ -1.71
MBD4O95243 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MBD4O95243 AC092451.1-201ENST00000480211 153 ntBASIC4.34□□□□□ -1.71
MBD4O95243 TMEM251P1-201ENST00000503717 318 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.34□□□□□ -1.71
MBD4O95243 HMGB1P22-201ENST00000505315 124 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC006390.1-201ENST00000508068 283 ntBASIC4.34□□□□□ -1.71
MBD4O95243 FABP5P12-201ENST00000515543 389 ntBASIC4.34□□□□□ -1.71
MBD4O95243 RN7SKP13-201ENST00000515933 244 ntBASIC4.34□□□□□ -1.71
MBD4O95243 RNY4P37-201ENST00000516225 96 ntBASIC4.34□□□□□ -1.71
MBD4O95243 SNORA31.20-201ENST00000517111 133 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.34□□□□□ -1.71
MBD4O95243 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.34□□□□□ -1.71
MBD4O95243 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
MBD4O95243 AC091515.1-201ENST00000548110 679 ntBASIC4.34□□□□□ -1.71
MBD4O95243 CCNG2P1-201ENST00000549521 1000 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.34□□□□□ -1.71
MBD4O95243 MIR4644-201ENST00000579929 84 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC020914.6-201ENST00000594327 272 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.34□□□□□ -1.71
MBD4O95243 AL391001.1-201ENST00000602747 715 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC010591.1-201ENST00000603941 649 ntBASIC4.34□□□□□ -1.71
MBD4O95243 AC110741.2-201ENST00000605278 268 ntBASIC4.34□□□□□ -1.71
MBD4O95243 HMGB1P50-201ENST00000605814 607 ntBASIC4.34□□□□□ -1.71
MBD4O95243 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
MBD4O95243 AC018755.4-201ENST00000619715 454 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms