Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 AC126323.6-202ENST00000568092 3511 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM13O60858 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TRIM13O60858 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 SNRPEP3-201ENST00000338402 276 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 RNU1-35P-201ENST00000362782 153 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 RNU6-379P-201ENST00000363813 104 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 SNORA77-201ENST00000408716 125 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 RNU2-9P-201ENST00000410194 145 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 RPS12P24-201ENST00000412619 387 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 CKS1BP6-201ENST00000424932 240 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 BX323845.1-201ENST00000432417 179 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 RPS26P40-201ENST00000435209 294 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 AL356276.2-201ENST00000435919 558 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM13O60858 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM13O60858 RPS29P9-201ENST00000440360 171 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM13O60858 AP000281.1-201ENST00000444036 316 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM13O60858 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM13O60858 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM13O60858 MRPS35P2-201ENST00000508242 191 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 RNU6-406P-201ENST00000516470 107 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 AC104986.1-201ENST00000517978 436 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM13O60858 OR5D15P-201ENST00000531671 942 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM13O60858 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM13O60858 AC099489.2-201ENST00000574976 260 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 MIR3167-201ENST00000579623 85 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM13O60858 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM13O60858 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM13O60858 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.92□□□□□ -1.62
TRIM13O60858 AL390240.1-201ENST00000612950 384 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM13O60858 U2.22-201ENST00000636441 106 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 ZNF519P1-201ENST00000449011 1626 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM13O60858 AL606537.1-201ENST00000607258 2011 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 AC006020.1-201ENST00000420179 1854 ntBASIC4.92□□□□□ -1.62
TRIM13O60858 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM13O60858 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 AC025125.1-201ENST00000624743 1922 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 SALL4P2-201ENST00000423288 2910 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 TAB3P1-202ENST00000452645 1634 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM13O60858 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
TRIM13O60858 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 RNU5E-1-201ENST00000362477 120 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 Y_RNA.158-201ENST00000363651 101 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM13O60858 Y_RNA.557-201ENST00000384680 107 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM13O60858 AC009804.1-201ENST00000400949 179 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AL121972.1-201ENST00000402023 252 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 MRPL42P2-201ENST00000403169 426 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AP000580.1-201ENST00000404439 358 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AL121834.1-202ENST00000404494 277 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 Y_RNA.615-201ENST00000410769 117 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 RN7SKP286-201ENST00000410894 299 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM13O60858 CHEK2P3-201ENST00000416118 248 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AL807761.1-201ENST00000417622 171 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM13O60858 EIF4HP2-201ENST00000424380 563 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC104837.2-201ENST00000427236 424 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM13O60858 PPIAP13-201ENST00000434706 478 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM13O60858 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM13O60858 RPS24P13-201ENST00000442520 397 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM13O60858 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM13O60858 AL645937.3-201ENST00000453647 936 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 RN7SL517P-201ENST00000462240 305 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC005912.1-201ENST00000495392 255 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 RN7SL466P-201ENST00000497546 295 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC025674.1-201ENST00000507074 324 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 TTC39CP1-201ENST00000512513 755 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM13O60858 AC009902.1-201ENST00000519351 183 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC022616.6-201ENST00000520479 119 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM13O60858 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM13O60858 AC012339.2-201ENST00000523996 453 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms