Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.21□□□□□ -1.9
HCN1O60741 PTP4A1P7-201ENST00000423476 514 ntBASIC3.21□□□□□ -1.9
HCN1O60741 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.21□□□□□ -1.9
HCN1O60741 BX890604.2-201ENST00000427883 474 ntBASIC3.21□□□□□ -1.9
HCN1O60741 RPL31P54-201ENST00000429803 370 ntBASIC3.21□□□□□ -1.9
HCN1O60741 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.21□□□□□ -1.9
HCN1O60741 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCN1O60741 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCN1O60741 COX6CP18-201ENST00000448769 222 ntBASIC3.21□□□□□ -1.9
HCN1O60741 NDUFA5P7-201ENST00000452914 242 ntBASIC3.21□□□□□ -1.9
HCN1O60741 MRPL42P4-201ENST00000453267 443 ntBASIC3.21□□□□□ -1.9
HCN1O60741 AP000563.1-201ENST00000490865 758 ntBASIC3.21□□□□□ -1.9
HCN1O60741 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.21□□□□□ -1.9
HCN1O60741 AC074250.1-201ENST00000511117 192 ntBASIC3.21□□□□□ -1.9
HCN1O60741 AC008837.1-201ENST00000511513 412 ntBASIC3.21□□□□□ -1.9
HCN1O60741 SNORA70.19-201ENST00000516717 90 ntBASIC3.21□□□□□ -1.9
HCN1O60741 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.21□□□□□ -1.9
HCN1O60741 UBE2NP1-201ENST00000545592 458 ntBASIC3.21□□□□□ -1.9
HCN1O60741 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.21□□□□□ -1.9
HCN1O60741 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.21□□□□□ -1.9
HCN1O60741 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.21□□□□□ -1.9
HCN1O60741 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.21□□□□□ -1.9
HCN1O60741 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.21□□□□□ -1.9
HCN1O60741 AL365400.2-201ENST00000605604 902 ntBASIC3.21□□□□□ -1.9
HCN1O60741 AL583856.2-201ENST00000606298 543 ntBASIC3.21□□□□□ -1.9
HCN1O60741 AC016877.3-201ENST00000606778 504 ntBASIC3.21□□□□□ -1.9
HCN1O60741 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.9
HCN1O60741 AL049777.1-201ENST00000622740 518 ntBASIC3.21□□□□□ -1.9
HCN1O60741 MTND5P1-201ENST00000445440 1375 ntBASIC3.21□□□□□ -1.9
HCN1O60741 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.21□□□□□ -1.9
HCN1O60741 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HCN1O60741 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HCN1O60741 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCN1O60741 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HCN1O60741 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCN1O60741 AC004925.1-201ENST00000624256 2706 ntBASIC3.2□□□□□ -1.9
HCN1O60741 RNA5SP383-201ENST00000362934 120 ntBASIC3.2□□□□□ -1.9
HCN1O60741 RNU6-839P-201ENST00000363347 108 ntBASIC3.2□□□□□ -1.9
HCN1O60741 RNU6-236P-201ENST00000363886 106 ntBASIC3.2□□□□□ -1.9
HCN1O60741 RNU6-115P-201ENST00000364310 107 ntBASIC3.2□□□□□ -1.9
HCN1O60741 RNU6-629P-201ENST00000384061 103 ntBASIC3.2□□□□□ -1.9
HCN1O60741 MIR217-201ENST00000384817 110 ntBASIC3.2□□□□□ -1.9
HCN1O60741 RNU6-837P-201ENST00000391056 108 ntBASIC3.2□□□□□ -1.9
HCN1O60741 RPL17P50-201ENST00000396131 546 ntBASIC3.2□□□□□ -1.9
HCN1O60741 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.2□□□□□ -1.9
HCN1O60741 RN7SKP111-201ENST00000410349 271 ntBASIC3.2□□□□□ -1.9
HCN1O60741 AC126124.2-201ENST00000413542 321 ntBASIC3.2□□□□□ -1.9
HCN1O60741 RPS7P9-201ENST00000414704 586 ntBASIC3.2□□□□□ -1.9
HCN1O60741 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.2□□□□□ -1.9
HCN1O60741 USP9YP21-201ENST00000420603 432 ntBASIC3.2□□□□□ -1.9
HCN1O60741 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.2□□□□□ -1.9
HCN1O60741 C1DP1-201ENST00000426049 402 ntBASIC3.2□□□□□ -1.9
HCN1O60741 HIGD1AP11-201ENST00000438361 280 ntBASIC3.2□□□□□ -1.9
HCN1O60741 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.2□□□□□ -1.9
HCN1O60741 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HCN1O60741 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.2□□□□□ -1.9
HCN1O60741 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN1O60741 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.2□□□□□ -1.9
HCN1O60741 RPL23AP67-201ENST00000465341 474 ntBASIC3.2□□□□□ -1.9
HCN1O60741 PLGLA-201ENST00000465668 449 ntBASIC3.2□□□□□ -1.9
HCN1O60741 AL136126.1-201ENST00000473603 402 ntBASIC3.2□□□□□ -1.9
HCN1O60741 AC021205.2-201ENST00000480069 347 ntBASIC3.2□□□□□ -1.9
HCN1O60741 AL358832.1-201ENST00000497800 389 ntBASIC3.2□□□□□ -1.9
HCN1O60741 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN1O60741 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HCN1O60741 RNU1-61P-201ENST00000516107 151 ntBASIC3.2□□□□□ -1.9
HCN1O60741 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
HCN1O60741 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.2□□□□□ -1.9
HCN1O60741 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.2□□□□□ -1.9
HCN1O60741 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN1O60741 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN1O60741 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN1O60741 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN1O60741 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN1O60741 AL109653.1-201ENST00000603091 248 ntBASIC3.2□□□□□ -1.9
HCN1O60741 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.2□□□□□ -1.9
HCN1O60741 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HCN1O60741 AC002546.1-201ENST00000588041 2504 ntBASIC3.2□□□□□ -1.9
HCN1O60741 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.19□□□□□ -1.9
HCN1O60741 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.19□□□□□ -1.9
HCN1O60741 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN1O60741 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN1O60741 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
HCN1O60741 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HCN1O60741 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN1O60741 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HCN1O60741 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HCN1O60741 RNU6-1000P-201ENST00000391066 106 ntBASIC3.19□□□□□ -1.9
HCN1O60741 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN1O60741 AL121978.1-201ENST00000402778 359 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AL136133.1-201ENST00000413694 376 ntBASIC3.19□□□□□ -1.9
HCN1O60741 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.19□□□□□ -1.9
HCN1O60741 Z93242.1-201ENST00000427102 353 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC097713.2-201ENST00000430199 356 ntBASIC3.19□□□□□ -1.9
HCN1O60741 ATP5JP1-201ENST00000431631 322 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC005345.1-201ENST00000431868 217 ntBASIC3.19□□□□□ -1.9
HCN1O60741 AC005019.1-201ENST00000436455 431 ntBASIC3.19□□□□□ -1.9
HCN1O60741 PTGES3P1-201ENST00000439531 483 ntBASIC3.19□□□□□ -1.9
HCN1O60741 RNF2P1-201ENST00000442955 1010 ntBASIC3.19□□□□□ -1.9
HCN1O60741 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms