Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SNORD17-201ENST00000390930 237 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 EI24P2-201ENST00000397776 1076 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 MTND4LP20-201ENST00000402379 270 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AL121978.1-201ENST00000402778 359 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AL136116.1-201ENST00000403591 381 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.33□□□□□ -1.88
LCMT2O60294 OR4K6P-201ENST00000416478 897 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AC106883.1-201ENST00000418805 562 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.33□□□□□ -1.88
LCMT2O60294 AC006548.1-201ENST00000427470 102 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 USP9YP31-201ENST00000431405 881 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AC005345.1-201ENST00000431868 217 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.33□□□□□ -1.88
LCMT2O60294 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.33□□□□□ -1.88
LCMT2O60294 AC093155.1-201ENST00000440164 826 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AC112492.1-201ENST00000449607 712 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.33□□□□□ -1.88
LCMT2O60294 AC092754.2-201ENST00000463506 460 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AP002812.1-201ENST00000495378 474 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 GTF2IP9-201ENST00000502460 301 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.33□□□□□ -1.88
LCMT2O60294 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.33□□□□□ -1.88
LCMT2O60294 AC006499.5-201ENST00000505037 514 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.33□□□□□ -1.88
LCMT2O60294 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.33□□□□□ -1.88
LCMT2O60294 AL049838.1-201ENST00000563647 981 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 MIR4444-1-201ENST00000581696 74 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 MIR4444-2-201ENST00000584390 74 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AC015688.2-201ENST00000584523 262 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.33□□□□□ -1.88
LCMT2O60294 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.33□□□□□ -1.88
LCMT2O60294 XIAPP1-201ENST00000603162 600 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 RMST_8.1-201ENST00000610287 165 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AL450489.1-201ENST00000612071 468 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AC073968.1-201ENST00000618594 637 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 CR381572.1-201ENST00000625098 102 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 MTND2P41-201ENST00000637599 773 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 ZNF542P-204ENST00000482727 1305 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
LCMT2O60294 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LCMT2O60294 AL645937.1-201ENST00000641739 1652 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 AP005901.5-201ENST00000545779 1796 ntBASIC3.33□□□□□ -1.88
LCMT2O60294 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.33□□□□□ -1.88
LCMT2O60294 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 AC130650.2-201ENST00000618736 2403 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 RNU6-50P-201ENST00000362356 103 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 snoZ40.1-201ENST00000364540 72 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
LCMT2O60294 DEFB109C-201ENST00000382575 264 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 DEFB109B-201ENST00000382656 264 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 MIR23B-201ENST00000384832 97 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AL023807.1-201ENST00000407932 359 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 RNU4-22P-201ENST00000411058 166 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.32□□□□□ -1.88
LCMT2O60294 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.32□□□□□ -1.88
LCMT2O60294 BX842559.1-201ENST00000419615 532 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.32□□□□□ -1.88
LCMT2O60294 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.32□□□□□ -1.88
LCMT2O60294 RPL31P12-201ENST00000422587 358 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 MTCO1P3-201ENST00000429327 192 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
LCMT2O60294 NANOGP2-201ENST00000435391 727 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 GTF2IP7-202ENST00000436677 309 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.32□□□□□ -1.88
LCMT2O60294 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.32□□□□□ -1.88
LCMT2O60294 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.32□□□□□ -1.88
LCMT2O60294 AL031313.1-201ENST00000448435 256 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LCMT2O60294 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.32□□□□□ -1.88
LCMT2O60294 AC069528.1-202ENST00000482888 637 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.32□□□□□ -1.88
LCMT2O60294 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LCMT2O60294 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.32□□□□□ -1.88
LCMT2O60294 AC110768.1-201ENST00000509222 400 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 MTCYBP37-201ENST00000510642 1133 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AC093331.1-201ENST00000521474 169 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.32□□□□□ -1.88
LCMT2O60294 AC007458.1-201ENST00000542812 373 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.32□□□□□ -1.88
LCMT2O60294 AL121603.1-201ENST00000553815 142 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.32□□□□□ -1.88
LCMT2O60294 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.32□□□□□ -1.88
LCMT2O60294 MIR4429-201ENST00000580105 73 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 VN1R83P-201ENST00000595685 445 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.32□□□□□ -1.88
LCMT2O60294 GAS5-AS1-201ENST00000602767 694 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AL365503.1-201ENST00000605247 905 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.32□□□□□ -1.88
LCMT2O60294 RNU4-5P-201ENST00000607255 135 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AC027449.1-201ENST00000608890 407 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 MIR7851-201ENST00000610611 160 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 AL138478.1-201ENST00000612252 832 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms