Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL353706.1-201ENST00000436728 494 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKNO60260 COX6CP2-201ENST00000444980 225 ntBASIC3.62□□□□□ -1.83
PRKNO60260 EPS15P1-201ENST00000448836 336 ntBASIC3.62□□□□□ -1.83
PRKNO60260 NDUFS5P3-201ENST00000450668 321 ntBASIC3.62□□□□□ -1.83
PRKNO60260 RPL7P24-201ENST00000493052 752 ntBASIC3.62□□□□□ -1.83
PRKNO60260 RN7SL323P-201ENST00000494712 295 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PRKNO60260 MTCO3P7-201ENST00000510008 774 ntBASIC3.62□□□□□ -1.83
PRKNO60260 MTND3P5-201ENST00000512798 333 ntBASIC3.62□□□□□ -1.83
PRKNO60260 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKNO60260 MTND4LP31-201ENST00000514859 294 ntBASIC3.62□□□□□ -1.83
PRKNO60260 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKNO60260 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKNO60260 AC087276.1-201ENST00000529659 480 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKNO60260 AC074029.1-201ENST00000552531 1044 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKNO60260 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 AC034105.4-201ENST00000568304 277 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AC012213.3-201ENST00000577199 777 ntBASIC3.62□□□□□ -1.83
PRKNO60260 MIR5685-201ENST00000579080 79 ntBASIC3.62□□□□□ -1.83
PRKNO60260 MIR4637-201ENST00000582405 84 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKNO60260 MAGOH2P-202ENST00000584384 429 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AC006130.2-201ENST00000586202 326 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AC093227.2-201ENST00000589357 285 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 AC128687.1-201ENST00000605304 619 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AC239868.4-201ENST00000608318 671 ntBASIC3.62□□□□□ -1.83
PRKNO60260 AC090116.1-201ENST00000615679 446 ntBASIC3.62□□□□□ -1.83
PRKNO60260 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKNO60260 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKNO60260 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PRKNO60260 MTND5P28-201ENST00000438005 1594 ntBASIC3.62□□□□□ -1.83
PRKNO60260 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKNO60260 PABPC1P9-201ENST00000426076 1612 ntBASIC3.62□□□□□ -1.83
PRKNO60260 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PRKNO60260 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKNO60260 AC092104.1-201ENST00000497346 1441 ntBASIC3.61□□□□□ -1.83
PRKNO60260 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.61□□□□□ -1.83
PRKNO60260 OR4G11P-202ENST00000642116 1414 ntBASIC3.61□□□□□ -1.83
PRKNO60260 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKNO60260 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.61□□□□□ -1.83
PRKNO60260 AL031985.3-201ENST00000565390 2449 ntBASIC3.61□□□□□ -1.83
PRKNO60260 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRKNO60260 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PRKNO60260 RNU6-462P-201ENST00000362659 105 ntBASIC3.61□□□□□ -1.83
PRKNO60260 RNU5F-7P-201ENST00000363696 115 ntBASIC3.61□□□□□ -1.83
PRKNO60260 RNU6-1243P-201ENST00000364028 107 ntBASIC3.61□□□□□ -1.83
PRKNO60260 RNU4-75P-201ENST00000364621 146 ntBASIC3.61□□□□□ -1.83
PRKNO60260 SNORA51.6-201ENST00000384151 125 ntBASIC3.61□□□□□ -1.83
PRKNO60260 AC016769.3-201ENST00000396562 315 ntBASIC3.61□□□□□ -1.83
PRKNO60260 ARF4P3-201ENST00000397387 509 ntBASIC3.61□□□□□ -1.83
PRKNO60260 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.61□□□□□ -1.83
PRKNO60260 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.61□□□□□ -1.83
PRKNO60260 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.61□□□□□ -1.83
PRKNO60260 CYCSP46-201ENST00000423569 204 ntBASIC3.61□□□□□ -1.83
PRKNO60260 OR4F13P-201ENST00000428478 931 ntBASIC3.61□□□□□ -1.83
PRKNO60260 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKNO60260 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKNO60260 AL512286.1-201ENST00000439244 400 ntBASIC3.61□□□□□ -1.83
PRKNO60260 HMGB1P37-201ENST00000439613 609 ntBASIC3.61□□□□□ -1.83
PRKNO60260 AL831737.1-201ENST00000441288 271 ntBASIC3.61□□□□□ -1.83
PRKNO60260 MTCO1P19-201ENST00000443487 500 ntBASIC3.61□□□□□ -1.83
PRKNO60260 SNRPGP9-201ENST00000456025 225 ntBASIC3.61□□□□□ -1.83
PRKNO60260 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKNO60260 RNU6-956P-201ENST00000458868 103 ntBASIC3.61□□□□□ -1.83
PRKNO60260 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.61□□□□□ -1.83
PRKNO60260 AC116337.2-201ENST00000477662 156 ntBASIC3.61□□□□□ -1.83
PRKNO60260 RN7SL132P-201ENST00000478131 296 ntBASIC3.61□□□□□ -1.83
PRKNO60260 TMEM251P1-201ENST00000503717 318 ntBASIC3.61□□□□□ -1.83
PRKNO60260 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.61□□□□□ -1.83
PRKNO60260 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.61□□□□□ -1.83
PRKNO60260 VWA8P1-201ENST00000510889 176 ntBASIC3.61□□□□□ -1.83
PRKNO60260 AC026726.1-201ENST00000512859 601 ntBASIC3.61□□□□□ -1.83
PRKNO60260 SCARNA14-201ENST00000516903 136 ntBASIC3.61□□□□□ -1.83
PRKNO60260 MYL12AP1-201ENST00000518490 515 ntBASIC3.61□□□□□ -1.83
PRKNO60260 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.61□□□□□ -1.83
PRKNO60260 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKNO60260 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.61□□□□□ -1.83
PRKNO60260 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.61□□□□□ -1.83
PRKNO60260 AC012414.6-201ENST00000568241 401 ntBASIC3.61□□□□□ -1.83
PRKNO60260 AC136618.2-201ENST00000575091 400 ntBASIC3.61□□□□□ -1.83
PRKNO60260 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.61□□□□□ -1.83
PRKNO60260 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.61□□□□□ -1.83
PRKNO60260 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.61□□□□□ -1.83
PRKNO60260 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.61□□□□□ -1.83
PRKNO60260 AC012360.2-201ENST00000609349 391 ntBASIC3.61□□□□□ -1.83
PRKNO60260 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRKNO60260 AC026368.1-201ENST00000614934 690 ntBASIC3.61□□□□□ -1.83
PRKNO60260 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRKNO60260 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKNO60260 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.61□□□□□ -1.83
PRKNO60260 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.61□□□□□ -1.83
PRKNO60260 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms