Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.26□□□□□ -1.89
CHMP2AO43633 snoU13.3-201ENST00000459441 104 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 RPL21P41-201ENST00000459863 264 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 RN7SL75P-201ENST00000461926 281 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AP001486.1-201ENST00000463339 476 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AC096576.1-201ENST00000489014 359 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AC068657.1-201ENST00000520807 306 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.26□□□□□ -1.89
CHMP2AO43633 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP2AO43633 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP2AO43633 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP2AO43633 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP2AO43633 AL033523.1-201ENST00000605153 153 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 HSPE1P14-201ENST00000605812 302 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AC016877.3-201ENST00000606778 504 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AC004775.1-201ENST00000607389 753 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.26□□□□□ -1.89
CHMP2AO43633 AL390240.1-201ENST00000612950 384 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP2AO43633 AC024595.1-201ENST00000623088 387 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AC090617.9-201ENST00000623751 147 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AC006963.1-201ENST00000624003 1052 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 AL590396.2-201ENST00000636511 1041 ntBASIC3.26□□□□□ -1.89
CHMP2AO43633 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.26□□□□□ -1.89
CHMP2AO43633 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP2AO43633 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.26□□□□□ -1.89
CHMP2AO43633 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP2AO43633 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.25□□□□□ -1.89
CHMP2AO43633 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.25□□□□□ -1.89
CHMP2AO43633 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHMP2AO43633 AL354719.1-201ENST00000406535 843 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 RNA5SP293-201ENST00000410527 113 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 RNU6-272P-201ENST00000411028 104 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 AL592148.1-201ENST00000413568 445 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.25□□□□□ -1.89
CHMP2AO43633 AL590623.1-201ENST00000427864 105 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 MTND4LP7-201ENST00000431728 294 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 HMGN2P20-201ENST00000437531 273 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.25□□□□□ -1.89
CHMP2AO43633 AL135938.1-201ENST00000443141 297 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.25□□□□□ -1.89
CHMP2AO43633 RPS17P11-201ENST00000474297 293 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 HMGN2P13-201ENST00000476476 274 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 AC015724.1-201ENST00000478577 156 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
CHMP2AO43633 AC004062.1-201ENST00000509926 645 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 AC133963.2-201ENST00000513686 578 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.25□□□□□ -1.89
CHMP2AO43633 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.25□□□□□ -1.89
CHMP2AO43633 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.25□□□□□ -1.89
CHMP2AO43633 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.25□□□□□ -1.89
CHMP2AO43633 CYCSP39-201ENST00000565821 309 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.25□□□□□ -1.89
CHMP2AO43633 AC113368.1-201ENST00000603736 382 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 STMN1P1-201ENST00000617809 440 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.25□□□□□ -1.89
CHMP2AO43633 AL109659.3-201ENST00000624985 950 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 AC017104.5-201ENST00000637647 639 ntBASIC3.25□□□□□ -1.89
CHMP2AO43633 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHMP2AO43633 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHMP2AO43633 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHMP2AO43633 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CHMP2AO43633 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHMP2AO43633 SAGE4P-201ENST00000442271 3381 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.24□□□□□ -1.89
CHMP2AO43633 RNU6-50P-201ENST00000362356 103 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHMP2AO43633 RNU6-1226P-201ENST00000384317 107 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHMP2AO43633 RNU1-101P-201ENST00000391171 127 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 U3.26-201ENST00000391236 204 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 RPS20P25-201ENST00000412447 352 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.24□□□□□ -1.89
CHMP2AO43633 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.24□□□□□ -1.89
CHMP2AO43633 RPS20P5-201ENST00000434808 360 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AC107083.1-201ENST00000439643 279 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AL691517.1-201ENST00000440833 1235 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 NIPA2P5-201ENST00000452282 464 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 DNAJC19P8-201ENST00000452887 259 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AL049873.1-201ENST00000480540 376 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 FAM60DP-201ENST00000524174 632 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AC092470.1-201ENST00000546187 132 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.24□□□□□ -1.89
CHMP2AO43633 OR4T1P-201ENST00000554933 911 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.24□□□□□ -1.89
CHMP2AO43633 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.24□□□□□ -1.89
CHMP2AO43633 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.24□□□□□ -1.89
CHMP2AO43633 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.24□□□□□ -1.89
CHMP2AO43633 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.24□□□□□ -1.89
CHMP2AO43633 AL133393.1-201ENST00000603277 287 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 KATNBL1P1-201ENST00000605192 748 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AC107294.3-201ENST00000609211 526 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AC020658.4-201ENST00000613987 684 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AC025016.1-201ENST00000616746 682 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AL590240.3-201ENST00000621416 943 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AL136164.4-201ENST00000625013 2135 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 AC083865.1-201ENST00000636634 831 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms