Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPL21P12-201ENST00000559810 515 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.78□□□□□ -1.96
SGCEO43556 MIR1254-2-201ENST00000579553 63 ntBASIC2.78□□□□□ -1.96
SGCEO43556 COX6CP3-201ENST00000580869 223 ntBASIC2.78□□□□□ -1.96
SGCEO43556 ZNF415P1-201ENST00000582279 1166 ntBASIC2.78□□□□□ -1.96
SGCEO43556 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.78□□□□□ -1.96
SGCEO43556 AC092474.3-201ENST00000603022 568 ntBASIC2.78□□□□□ -1.96
SGCEO43556 BX322635.1-201ENST00000605804 496 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AC069234.5-201ENST00000611056 416 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AL355810.1-201ENST00000614629 552 ntBASIC2.78□□□□□ -1.96
SGCEO43556 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 AC084757.4-201ENST00000616350 526 ntBASIC2.78□□□□□ -1.96
SGCEO43556 FRG1HP-204ENST00000617940 757 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AC012314.7-201ENST00000619693 93 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AL360181.4-201ENST00000621752 134 ntBASIC2.78□□□□□ -1.96
SGCEO43556 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
SGCEO43556 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SGCEO43556 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SGCEO43556 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.78□□□□□ -1.96
SGCEO43556 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.78□□□□□ -1.96
SGCEO43556 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SGCEO43556 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SGCEO43556 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SGCEO43556 RNA5SP72-201ENST00000364442 117 ntBASIC2.77□□□□□ -1.97
SGCEO43556 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.77□□□□□ -1.97
SGCEO43556 SNORA48.7-201ENST00000391302 135 ntBASIC2.77□□□□□ -1.97
SGCEO43556 RN7SKP27-201ENST00000410684 333 ntBASIC2.77□□□□□ -1.97
SGCEO43556 DUTP6-201ENST00000425573 462 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.77□□□□□ -1.97
SGCEO43556 MTND4LP14-201ENST00000429447 288 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.77□□□□□ -1.97
SGCEO43556 AC006028.1-201ENST00000438379 402 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AC044797.1-201ENST00000445744 679 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AC004022.1-201ENST00000447766 1066 ntBASIC2.77□□□□□ -1.97
SGCEO43556 RPL23AP20-201ENST00000447965 421 ntBASIC2.77□□□□□ -1.97
SGCEO43556 RPS4XP10-201ENST00000465034 731 ntBASIC2.77□□□□□ -1.97
SGCEO43556 CABYRP1-201ENST00000465493 1045 ntBASIC2.77□□□□□ -1.97
SGCEO43556 PRDX3P4-201ENST00000470828 747 ntBASIC2.77□□□□□ -1.97
SGCEO43556 RPL32P34-201ENST00000486380 400 ntBASIC2.77□□□□□ -1.97
SGCEO43556 RPS27P23-201ENST00000487608 251 ntBASIC2.77□□□□□ -1.97
SGCEO43556 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SGCEO43556 AC111000.2-201ENST00000507775 550 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AC098799.2-201ENST00000509466 868 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.77□□□□□ -1.97
SGCEO43556 SNORA26.10-201ENST00000516427 141 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.77□□□□□ -1.97
SGCEO43556 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.77□□□□□ -1.97
SGCEO43556 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.77□□□□□ -1.97
SGCEO43556 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.77□□□□□ -1.97
SGCEO43556 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.77□□□□□ -1.97
SGCEO43556 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.77□□□□□ -1.97
SGCEO43556 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.77□□□□□ -1.97
SGCEO43556 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.77□□□□□ -1.97
SGCEO43556 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.77□□□□□ -1.97
SGCEO43556 ATP5F1P7-201ENST00000567330 760 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.77□□□□□ -1.97
SGCEO43556 AC006116.7-201ENST00000590141 756 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AC025588.3-201ENST00000604182 274 ntBASIC2.77□□□□□ -1.97
SGCEO43556 HSPE1P14-201ENST00000605812 302 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AC107871.2-201ENST00000612894 502 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AC091046.2-201ENST00000620775 665 ntBASIC2.77□□□□□ -1.97
SGCEO43556 MIR6075-201ENST00000620782 95 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AP003122.6-201ENST00000623831 495 ntBASIC2.77□□□□□ -1.97
SGCEO43556 OR8B1P-202ENST00000641132 1178 ntBASIC2.77□□□□□ -1.97
SGCEO43556 SGO1P2-201ENST00000429458 1589 ntBASIC2.77□□□□□ -1.97
SGCEO43556 AC024341.1-201ENST00000526444 1552 ntBASIC2.77□□□□□ -1.97
SGCEO43556 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SGCEO43556 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SGCEO43556 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.76□□□□□ -1.97
SGCEO43556 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.76□□□□□ -1.97
SGCEO43556 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.76□□□□□ -1.97
SGCEO43556 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SGCEO43556 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SGCEO43556 SNORA71.3-201ENST00000362582 128 ntBASIC2.76□□□□□ -1.97
SGCEO43556 SNORA14A-201ENST00000364773 135 ntBASIC2.76□□□□□ -1.97
SGCEO43556 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SGCEO43556 PNRC2P1-201ENST00000423940 420 ntBASIC2.76□□□□□ -1.97
SGCEO43556 UBE2D3P2-201ENST00000424409 445 ntBASIC2.76□□□□□ -1.97
SGCEO43556 USP9YP36-201ENST00000424581 829 ntBASIC2.76□□□□□ -1.97
SGCEO43556 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.76□□□□□ -1.97
SGCEO43556 AC093422.3-201ENST00000428506 305 ntBASIC2.76□□□□□ -1.97
SGCEO43556 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.76□□□□□ -1.97
SGCEO43556 OR6K1P-201ENST00000456766 971 ntBASIC2.76□□□□□ -1.97
SGCEO43556 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.76□□□□□ -1.97
SGCEO43556 RN7SL601P-201ENST00000471221 293 ntBASIC2.76□□□□□ -1.97
SGCEO43556 AC109925.1-201ENST00000478069 331 ntBASIC2.76□□□□□ -1.97
SGCEO43556 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.76□□□□□ -1.97
SGCEO43556 SNORA31.8-201ENST00000516327 108 ntBASIC2.76□□□□□ -1.97
SGCEO43556 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.76□□□□□ -1.97
SGCEO43556 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.76□□□□□ -1.97
SGCEO43556 MIR4444-1-201ENST00000581696 74 ntBASIC2.76□□□□□ -1.97
SGCEO43556 MIR4444-2-201ENST00000584390 74 ntBASIC2.76□□□□□ -1.97
SGCEO43556 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.76□□□□□ -1.97
SGCEO43556 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.76□□□□□ -1.97
SGCEO43556 VN1R88P-201ENST00000596787 292 ntBASIC2.76□□□□□ -1.97
SGCEO43556 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms