Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 RPL30P2-201ENST00000414021 291 ntBASIC3.54□□□□□ -1.84
E2F3O00716 RPS7P9-201ENST00000414704 586 ntBASIC3.54□□□□□ -1.84
E2F3O00716 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.54□□□□□ -1.84
E2F3O00716 MTCO3P12-201ENST00000416718 547 ntBASIC3.54□□□□□ -1.84
E2F3O00716 SDCBPP2-201ENST00000424643 885 ntBASIC3.54□□□□□ -1.84
E2F3O00716 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.54□□□□□ -1.84
E2F3O00716 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.54□□□□□ -1.84
E2F3O00716 TXNP1-201ENST00000441872 371 ntBASIC3.54□□□□□ -1.84
E2F3O00716 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.54□□□□□ -1.84
E2F3O00716 MTCYBP42-201ENST00000444653 1130 ntBASIC3.54□□□□□ -1.84
E2F3O00716 PRDX3P3-201ENST00000447765 522 ntBASIC3.54□□□□□ -1.84
E2F3O00716 PLGLA-201ENST00000465668 449 ntBASIC3.54□□□□□ -1.84
E2F3O00716 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.54□□□□□ -1.84
E2F3O00716 AC012181.1-201ENST00000479895 423 ntBASIC3.54□□□□□ -1.84
E2F3O00716 AC108729.1-201ENST00000487812 947 ntBASIC3.54□□□□□ -1.84
E2F3O00716 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.54□□□□□ -1.84
E2F3O00716 AC118282.2-201ENST00000508739 374 ntBASIC3.54□□□□□ -1.84
E2F3O00716 AC048346.1-201ENST00000510247 144 ntBASIC3.54□□□□□ -1.84
E2F3O00716 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.54□□□□□ -1.84
E2F3O00716 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.54□□□□□ -1.84
E2F3O00716 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
E2F3O00716 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.54□□□□□ -1.84
E2F3O00716 AL160237.3-201ENST00000604114 1013 ntBASIC3.54□□□□□ -1.84
E2F3O00716 AC002487.1-201ENST00000604565 994 ntBASIC3.54□□□□□ -1.84
E2F3O00716 AC128687.1-201ENST00000605304 619 ntBASIC3.54□□□□□ -1.84
E2F3O00716 AL159169.3-201ENST00000608871 561 ntBASIC3.54□□□□□ -1.84
E2F3O00716 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.54□□□□□ -1.84
E2F3O00716 VN1R7P-201ENST00000619242 903 ntBASIC3.54□□□□□ -1.84
E2F3O00716 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.54□□□□□ -1.84
E2F3O00716 MTND2P41-201ENST00000637599 773 ntBASIC3.54□□□□□ -1.84
E2F3O00716 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.54□□□□□ -1.84
E2F3O00716 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.54□□□□□ -1.84
E2F3O00716 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
E2F3O00716 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
E2F3O00716 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
E2F3O00716 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
E2F3O00716 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
E2F3O00716 RNU6-115P-201ENST00000364310 107 ntBASIC3.53□□□□□ -1.84
E2F3O00716 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
E2F3O00716 DEFB109C-201ENST00000382575 264 ntBASIC3.53□□□□□ -1.84
E2F3O00716 DEFB109B-201ENST00000382656 264 ntBASIC3.53□□□□□ -1.84
E2F3O00716 RNU6-730P-201ENST00000383954 104 ntBASIC3.53□□□□□ -1.84
E2F3O00716 SNORD116-12-201ENST00000384468 92 ntBASIC3.53□□□□□ -1.84
E2F3O00716 RNU6-821P-201ENST00000390995 107 ntBASIC3.53□□□□□ -1.84
E2F3O00716 TMSB4XP8-201ENST00000402089 135 ntBASIC3.53□□□□□ -1.84
E2F3O00716 MTND4LP20-201ENST00000402379 270 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AL023807.1-201ENST00000407932 359 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 TMSB4XP6-201ENST00000415187 135 ntBASIC3.53□□□□□ -1.84
E2F3O00716 KRR1P1-201ENST00000419430 803 ntBASIC3.53□□□□□ -1.84
E2F3O00716 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 TMSB4XP1-201ENST00000424567 135 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AP000907.1-201ENST00000428428 510 ntBASIC3.53□□□□□ -1.84
E2F3O00716 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 Z80107.1-201ENST00000436830 412 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AC010655.1-201ENST00000449336 292 ntBASIC3.53□□□□□ -1.84
E2F3O00716 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
E2F3O00716 TRBV26-201ENST00000456572 344 ntBASIC3.53□□□□□ -1.84
E2F3O00716 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 RPL21P131-201ENST00000497298 483 ntBASIC3.53□□□□□ -1.84
E2F3O00716 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
E2F3O00716 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.53□□□□□ -1.84
E2F3O00716 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.53□□□□□ -1.84
E2F3O00716 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.53□□□□□ -1.84
E2F3O00716 AP006245.1-201ENST00000522549 120 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AP000790.1-201ENST00000528891 737 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.53□□□□□ -1.84
E2F3O00716 UBE2NP1-201ENST00000545592 458 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 AC044913.1-201ENST00000557200 430 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.53□□□□□ -1.84
E2F3O00716 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.53□□□□□ -1.84
E2F3O00716 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.53□□□□□ -1.84
E2F3O00716 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.53□□□□□ -1.84
E2F3O00716 AC024060.1-201ENST00000607052 494 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AL450489.1-201ENST00000612071 468 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AC008121.2-201ENST00000614647 523 ntBASIC3.53□□□□□ -1.84
E2F3O00716 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
E2F3O00716 AL078595.3-201ENST00000623815 1166 ntBASIC3.53□□□□□ -1.84
E2F3O00716 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.53□□□□□ -1.84
E2F3O00716 AL365440.1-201ENST00000436135 2167 ntBASIC3.53□□□□□ -1.84
E2F3O00716 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
E2F3O00716 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.53□□□□□ -1.84
E2F3O00716 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.85
E2F3O00716 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
E2F3O00716 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.52□□□□□ -1.85
E2F3O00716 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
E2F3O00716 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
E2F3O00716 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
E2F3O00716 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.52□□□□□ -1.85
E2F3O00716 AC073346.2-201ENST00000624724 2058 ntBASIC3.52□□□□□ -1.85
E2F3O00716 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
E2F3O00716 RNU6-50P-201ENST00000362356 103 ntBASIC3.52□□□□□ -1.85
E2F3O00716 RNU6-1249P-201ENST00000363237 111 ntBASIC3.52□□□□□ -1.85
E2F3O00716 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms