Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.43□□□□□ -2.02
CACNA1AO00555 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.43□□□□□ -2.02
CACNA1AO00555 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.43□□□□□ -2.02
CACNA1AO00555 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1AO00555 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
CACNA1AO00555 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1AO00555 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.42□□□□□ -2.02
CACNA1AO00555 AC005005.2-201ENST00000420779 380 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 Z73417.1-201ENST00000447373 778 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
CACNA1AO00555 IGHV3-63-201ENST00000518422 341 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 AC135628.1-201ENST00000568867 534 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 AC008638.3-201ENST00000603341 463 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 AC010872.1-201ENST00000624225 675 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 AC091903.1-201ENST00000624322 454 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CACNA1AO00555 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CACNA1AO00555 MTND5P6-201ENST00000422338 1798 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CACNA1AO00555 AC005332.5-201ENST00000591222 2919 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 RNA5SP146-201ENST00000410743 123 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 RPL31P12-201ENST00000422587 358 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.42□□□□□ -2.02
CACNA1AO00555 AC017099.1-201ENST00000448261 1028 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CACNA1AO00555 AC106872.3-201ENST00000495104 446 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 NAMPTP2-201ENST00000505629 1115 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.42□□□□□ -2.02
CACNA1AO00555 AC112673.1-201ENST00000513168 575 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 RNA5SP281-201ENST00000516504 135 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CACNA1AO00555 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.42□□□□□ -2.02
CACNA1AO00555 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CACNA1AO00555 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CACNA1AO00555 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.42□□□□□ -2.02
CACNA1AO00555 DBF4P1-201ENST00000412976 1892 ntBASIC2.42□□□□□ -2.02
CACNA1AO00555 OR5H15-201ENST00000383696 930 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.41□□□□□ -2.02
CACNA1AO00555 SDCBPP3-201ENST00000419629 891 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 AL139109.1-201ENST00000455491 297 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 AC008526.1-201ENST00000509149 338 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 AC021733.2-201ENST00000518830 497 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 AP001636.2-201ENST00000525517 696 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.41□□□□□ -2.02
CACNA1AO00555 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.41□□□□□ -2.02
CACNA1AO00555 CYP2C60P-201ENST00000566088 139 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 AC074276.2-201ENST00000619891 348 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CACNA1AO00555 AC025263.3-201ENST00000622965 1396 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 MTND5P35-201ENST00000557537 1720 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CACNA1AO00555 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CACNA1AO00555 AL359511.1-201ENST00000402970 211 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 RN7SKP58-201ENST00000411010 305 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.41□□□□□ -2.02
CACNA1AO00555 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.41□□□□□ -2.02
CACNA1AO00555 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.41□□□□□ -2.02
CACNA1AO00555 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.41□□□□□ -2.02
CACNA1AO00555 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.41□□□□□ -2.02
CACNA1AO00555 OR10D4P-201ENST00000525892 951 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 AK6P1-201ENST00000540219 478 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 AC008687.2-201ENST00000597865 520 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
CACNA1AO00555 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CACNA1AO00555 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CACNA1AO00555 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CACNA1AO00555 RN7SKP32-201ENST00000410167 303 ntBASIC2.4□□□□□ -2.02
CACNA1AO00555 RPL23AP31-201ENST00000456160 467 ntBASIC2.4□□□□□ -2.02
CACNA1AO00555 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.4□□□□□ -2.02
CACNA1AO00555 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.4□□□□□ -2.02
CACNA1AO00555 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CACNA1AO00555 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.4□□□□□ -2.02
CACNA1AO00555 MIR486-1-201ENST00000612171 68 ntBASIC2.4□□□□□ -2.02
CACNA1AO00555 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.4□□□□□ -2.03
CACNA1AO00555 DEFB109C-201ENST00000382575 264 ntBASIC2.4□□□□□ -2.03
CACNA1AO00555 DEFB109B-201ENST00000382656 264 ntBASIC2.4□□□□□ -2.03
CACNA1AO00555 RNU6-35P-201ENST00000384530 107 ntBASIC2.4□□□□□ -2.03
CACNA1AO00555 RPL23AP4-201ENST00000427757 463 ntBASIC2.4□□□□□ -2.03
CACNA1AO00555 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.4□□□□□ -2.03
CACNA1AO00555 FAM60DP-201ENST00000524174 632 ntBASIC2.4□□□□□ -2.03
CACNA1AO00555 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.4□□□□□ -2.03
CACNA1AO00555 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.4□□□□□ -2.03
CACNA1AO00555 AC009039.2-201ENST00000624524 529 ntBASIC2.4□□□□□ -2.03
CACNA1AO00555 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.4□□□□□ -2.03
CACNA1AO00555 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.4□□□□□ -2.03
CACNA1AO00555 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.4□□□□□ -2.03
CACNA1AO00555 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CACNA1AO00555 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CACNA1AO00555 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
CACNA1AO00555 RNA5SP331-201ENST00000364986 107 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 HMGB3P11-201ENST00000440127 604 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.39□□□□□ -2.03
CACNA1AO00555 HMGB3P6-201ENST00000444896 598 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 AC010307.1-201ENST00000467206 836 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CACNA1AO00555 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.39□□□□□ -2.03
CACNA1AO00555 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.39□□□□□ -2.03
CACNA1AO00555 AL356490.1-201ENST00000623079 479 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 AC002064.3-201ENST00000623448 346 ntBASIC2.39□□□□□ -2.03
CACNA1AO00555 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms