Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RNA5SP515-201ENST00000364570 118 ntBASIC3.65□□□□□ -1.83
RTCAO00442 MIR506-201ENST00000384998 124 ntBASIC3.65□□□□□ -1.83
RTCAO00442 MIR199A2-201ENST00000385289 110 ntBASIC3.65□□□□□ -1.83
RTCAO00442 RNU2-28P-201ENST00000410457 189 ntBASIC3.65□□□□□ -1.83
RTCAO00442 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.65□□□□□ -1.83
RTCAO00442 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.65□□□□□ -1.83
RTCAO00442 XKRYP1-201ENST00000423438 492 ntBASIC3.65□□□□□ -1.83
RTCAO00442 MTCO1P39-201ENST00000426148 480 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.65□□□□□ -1.83
RTCAO00442 XKRYP2-201ENST00000432915 492 ntBASIC3.65□□□□□ -1.83
RTCAO00442 SEPT7P5-201ENST00000434048 306 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.65□□□□□ -1.83
RTCAO00442 AC004866.2-201ENST00000438285 481 ntBASIC3.65□□□□□ -1.83
RTCAO00442 RPS29P7-201ENST00000439662 171 ntBASIC3.65□□□□□ -1.83
RTCAO00442 MTCO2P25-201ENST00000447065 681 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AL500522.2-201ENST00000448562 343 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTCAO00442 RN7SL323P-201ENST00000494712 295 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.65□□□□□ -1.83
RTCAO00442 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.65□□□□□ -1.83
RTCAO00442 RAC1P2-201ENST00000511164 579 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTCAO00442 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.65□□□□□ -1.83
RTCAO00442 SNORA31.1-201ENST00000515993 133 ntBASIC3.65□□□□□ -1.83
RTCAO00442 SNORA31.5-201ENST00000516190 133 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.65□□□□□ -1.83
RTCAO00442 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.65□□□□□ -1.83
RTCAO00442 AP001804.3-201ENST00000525146 880 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC090502.2-201ENST00000549267 280 ntBASIC3.65□□□□□ -1.83
RTCAO00442 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.65□□□□□ -1.83
RTCAO00442 AADACP1-206ENST00000561502 1193 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC023813.2-201ENST00000564321 469 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.65□□□□□ -1.83
RTCAO00442 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.65□□□□□ -1.83
RTCAO00442 RN7SL703P-201ENST00000578485 302 ntBASIC3.65□□□□□ -1.83
RTCAO00442 COX6CP3-201ENST00000580869 223 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC053481.4-201ENST00000583164 216 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.65□□□□□ -1.83
RTCAO00442 MTND3P19-201ENST00000603825 345 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC063944.3-201ENST00000609969 533 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC079684.1-201ENST00000621405 437 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.65□□□□□ -1.83
RTCAO00442 MKKS-204ENST00000639674 192 ntBASIC3.65□□□□□ -1.83
RTCAO00442 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.65□□□□□ -1.83
RTCAO00442 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTCAO00442 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RTCAO00442 AC006504.1-201ENST00000562493 3666 ntBASIC3.65□□□□□ -1.83
RTCAO00442 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.64□□□□□ -1.83
RTCAO00442 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTCAO00442 RNU5D-1-201ENST00000363299 116 ntBASIC3.64□□□□□ -1.83
RTCAO00442 RNA5SP479-201ENST00000364858 117 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AL136372.1-201ENST00000403060 228 ntBASIC3.64□□□□□ -1.83
RTCAO00442 RNU2-15P-201ENST00000410692 191 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.64□□□□□ -1.83
RTCAO00442 UBE2D3P2-201ENST00000424409 445 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.64□□□□□ -1.83
RTCAO00442 RPL21P40-201ENST00000428586 483 ntBASIC3.64□□□□□ -1.83
RTCAO00442 MOB1AP1-201ENST00000430903 535 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AC093155.1-201ENST00000440164 826 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AC104308.1-201ENST00000454621 333 ntBASIC3.64□□□□□ -1.83
RTCAO00442 ST13P14-201ENST00000474095 734 ntBASIC3.64□□□□□ -1.83
RTCAO00442 TRBV12-2-201ENST00000489763 344 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.64□□□□□ -1.83
RTCAO00442 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.64□□□□□ -1.83
RTCAO00442 AC118282.1-201ENST00000506408 765 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.64□□□□□ -1.83
RTCAO00442 RN7SKP21-201ENST00000516503 220 ntBASIC3.64□□□□□ -1.83
RTCAO00442 SCARNA14-201ENST00000516903 136 ntBASIC3.64□□□□□ -1.83
RTCAO00442 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RTCAO00442 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.64□□□□□ -1.83
RTCAO00442 EEF1A1P37-201ENST00000522748 715 ntBASIC3.64□□□□□ -1.83
RTCAO00442 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.64□□□□□ -1.83
RTCAO00442 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.64□□□□□ -1.83
RTCAO00442 HSPE1P5-201ENST00000561489 272 ntBASIC3.64□□□□□ -1.83
RTCAO00442 BNIP3P26-201ENST00000600827 554 ntBASIC3.64□□□□□ -1.83
RTCAO00442 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.64□□□□□ -1.83
RTCAO00442 AC008962.1-201ENST00000605729 304 ntBASIC3.64□□□□□ -1.83
RTCAO00442 BRDTP1-201ENST00000605735 677 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AC091946.2-201ENST00000606105 291 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AC092954.1-201ENST00000609121 445 ntBASIC3.64□□□□□ -1.83
RTCAO00442 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.64□□□□□ -1.83
RTCAO00442 MIR6076-201ENST00000617521 113 ntBASIC3.64□□□□□ -1.83
RTCAO00442 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.64□□□□□ -1.83
RTCAO00442 AC006386.1-201ENST00000619436 415 ntBASIC3.64□□□□□ -1.83
RTCAO00442 MIR4727-201ENST00000622232 55 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AC073348.1-201ENST00000623002 331 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.64□□□□□ -1.83
RTCAO00442 SNORA50A-202ENST00000629536 136 ntBASIC3.64□□□□□ -1.83
RTCAO00442 AC006927.4-201ENST00000639187 543 ntBASIC3.64□□□□□ -1.83
RTCAO00442 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.64□□□□□ -1.83
RTCAO00442 Z99496.1-201ENST00000469424 1477 ntBASIC3.64□□□□□ -1.83
RTCAO00442 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.64□□□□□ -1.83
RTCAO00442 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTCAO00442 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTCAO00442 ZNF826P-207ENST00000622273 1910 ntBASIC3.64□□□□□ -1.83
RTCAO00442 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.63□□□□□ -1.83
RTCAO00442 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTCAO00442 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTCAO00442 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTCAO00442 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms