Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.19□□□□□ -1.9
SRRM4A7MD48 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.19□□□□□ -1.9
SRRM4A7MD48 MIR3690-201ENST00000580266 75 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 AC023575.1-201ENST00000580510 358 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 MIR3939-201ENST00000582614 106 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.19□□□□□ -1.9
SRRM4A7MD48 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.19□□□□□ -1.9
SRRM4A7MD48 AC020914.6-201ENST00000594327 272 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 AC006539.2-201ENST00000601729 572 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 XIAPP1-201ENST00000603162 600 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.19□□□□□ -1.9
SRRM4A7MD48 AL450489.1-201ENST00000612071 468 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 MIR486-1-201ENST00000612171 68 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 uc_338.32-201ENST00000615087 172 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.19□□□□□ -1.9
SRRM4A7MD48 MLECP1-201ENST00000615893 709 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 AL591424.2-201ENST00000617023 128 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRRM4A7MD48 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRRM4A7MD48 AL590240.3-201ENST00000621416 943 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 AC018816.2-201ENST00000621460 353 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 AC079416.3-201ENST00000624479 549 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 SGO1P2-201ENST00000429458 1589 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRRM4A7MD48 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SRRM4A7MD48 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.19□□□□□ -1.9
SRRM4A7MD48 UBE3AP2-201ENST00000429033 2259 ntBASIC3.19□□□□□ -1.9
SRRM4A7MD48 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SRRM4A7MD48 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
SRRM4A7MD48 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.19□□□□□ -1.9
SRRM4A7MD48 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRRM4A7MD48 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRRM4A7MD48 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRRM4A7MD48 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AL672296.1-201ENST00000427780 2158 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC092447.10-201ENST00000620607 1652 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRRM4A7MD48 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 RNA5SP130-201ENST00000364431 114 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 RNU6-1074P-201ENST00000383995 104 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 MIR3074-201ENST00000384885 81 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 RPS3AP26-201ENST00000398259 784 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AL049693.1-201ENST00000402760 611 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 RPL7AP73-201ENST00000413490 353 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC092447.6-201ENST00000414578 210 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC098592.1-201ENST00000419352 333 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 PTP4A1P5-201ENST00000420305 455 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 DUTP6-201ENST00000425573 462 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 HMGB1P37-201ENST00000439613 609 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 Z83846.1-201ENST00000446798 265 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AL353691.1-201ENST00000451332 387 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AL122001.1-201ENST00000457027 370 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 LINC00888-204ENST00000487386 421 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AP000563.1-201ENST00000490865 758 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC146944.2-203ENST00000502493 354 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC147055.4-201ENST00000504399 745 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC093809.1-201ENST00000509155 340 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC139495.1-202ENST00000513164 354 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 SNORA31.9-201ENST00000516429 84 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 MIR2114-201ENST00000516645 80 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 RNA5SP468-201ENST00000516782 93 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 ELOCP32-201ENST00000548625 324 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC091516.1-201ENST00000549191 703 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC025884.1-201ENST00000556034 378 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 ZNF192P1-203ENST00000565888 810 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC013444.2-201ENST00000603317 787 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC072039.2-201ENST00000608883 439 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC012531.5-201ENST00000611375 151 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 OR52H1-202ENST00000641796 1061 ntBASIC3.18□□□□□ -1.9
SRRM4A7MD48 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.18□□□□□ -1.9
SRRM4A7MD48 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms