Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 SNORA17.3-201ENST00000391159 129 ntBASIC3.05□□□□□ -1.92
RGPD3A6NKT7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 RPL23AP49-201ENST00000492925 468 ntBASIC3.05□□□□□ -1.92
RGPD3A6NKT7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 LRRC77P-213ENST00000637727 880 ntBASIC3.05□□□□□ -1.92
RGPD3A6NKT7 AC009452.1-201ENST00000640823 606 ntBASIC3.05□□□□□ -1.92
RGPD3A6NKT7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 RNA5SP88-201ENST00000365560 109 ntBASIC3.05□□□□□ -1.92
RGPD3A6NKT7 SEC63P1-201ENST00000425785 1258 ntBASIC3.05□□□□□ -1.92
RGPD3A6NKT7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 UBE2V2P4-201ENST00000447495 259 ntBASIC3.05□□□□□ -1.92
RGPD3A6NKT7 RPL23AP62-201ENST00000463396 453 ntBASIC3.05□□□□□ -1.92
RGPD3A6NKT7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 USP9YP5-201ENST00000511770 630 ntBASIC3.05□□□□□ -1.92
RGPD3A6NKT7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 HSPE1P18-201ENST00000517602 280 ntBASIC3.05□□□□□ -1.92
RGPD3A6NKT7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RGPD3A6NKT7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.04□□□□□ -1.92
RGPD3A6NKT7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.04□□□□□ -1.92
RGPD3A6NKT7 AC117522.2-201ENST00000510049 657 ntBASIC3.04□□□□□ -1.92
RGPD3A6NKT7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.04□□□□□ -1.92
RGPD3A6NKT7 AC090695.1-201ENST00000561269 1222 ntBASIC3.04□□□□□ -1.92
RGPD3A6NKT7 AC006254.3-201ENST00000603353 884 ntBASIC3.04□□□□□ -1.92
RGPD3A6NKT7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.04□□□□□ -1.92
RGPD3A6NKT7 MAPK10-322ENST00000641485 4530 ntBASIC3.04□□□□□ -1.92
RGPD3A6NKT7 EXOC5P1-201ENST00000510543 1969 ntBASIC3.04□□□□□ -1.92
RGPD3A6NKT7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.04□□□□□ -1.92
RGPD3A6NKT7 Z82205.1-201ENST00000428456 297 ntBASIC3.03□□□□□ -1.92
RGPD3A6NKT7 HMGB1P48-201ENST00000446155 598 ntBASIC3.03□□□□□ -1.92
RGPD3A6NKT7 NDUFS5P3-201ENST00000450668 321 ntBASIC3.03□□□□□ -1.92
RGPD3A6NKT7 AP000926.1-201ENST00000479573 241 ntBASIC3.03□□□□□ -1.92
RGPD3A6NKT7 LINC00888-204ENST00000487386 421 ntBASIC3.03□□□□□ -1.92
RGPD3A6NKT7 RNA5SP76-201ENST00000516277 87 ntBASIC3.03□□□□□ -1.92
RGPD3A6NKT7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.03□□□□□ -1.92
RGPD3A6NKT7 CD24P2-201ENST00000565486 219 ntBASIC3.03□□□□□ -1.92
RGPD3A6NKT7 AL450489.1-201ENST00000612071 468 ntBASIC3.03□□□□□ -1.92
RGPD3A6NKT7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.03□□□□□ -1.92
RGPD3A6NKT7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RGPD3A6NKT7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RGPD3A6NKT7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.93
RGPD3A6NKT7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.03□□□□□ -1.93
RGPD3A6NKT7 RNA5SP456-201ENST00000364002 114 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 RNU6-14P-201ENST00000384630 106 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 AC009969.1-201ENST00000438726 172 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 IFNWP4-201ENST00000453148 294 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 FAM92A1P2-202ENST00000504766 877 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 AC112673.1-201ENST00000513168 575 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 AL022099.1-201ENST00000604551 712 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 snoU13.31-201ENST00000607291 104 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 AC000123.2-201ENST00000623124 461 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 GABPAP-201ENST00000419271 1356 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 NPM1P10-201ENST00000398310 865 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 USP9YP20-201ENST00000419224 558 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 MTND4LP12-201ENST00000448237 295 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 VN1R17P-201ENST00000472048 1090 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 OR4A45P-201ENST00000529954 901 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.02□□□□□ -1.93
RGPD3A6NKT7 AC069234.5-201ENST00000611056 416 ntBASIC3.02□□□□□ -1.93
RGPD3A6NKT7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RGPD3A6NKT7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RGPD3A6NKT7 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RGPD3A6NKT7 RNU2-6P-201ENST00000411404 190 ntBASIC3.01□□□□□ -1.93
RGPD3A6NKT7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RGPD3A6NKT7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.01□□□□□ -1.93
RGPD3A6NKT7 AC026436.1-201ENST00000510537 270 ntBASIC3.01□□□□□ -1.93
RGPD3A6NKT7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.01□□□□□ -1.93
RGPD3A6NKT7 AC021733.2-201ENST00000518830 497 ntBASIC3.01□□□□□ -1.93
RGPD3A6NKT7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.01□□□□□ -1.93
RGPD3A6NKT7 MIR5007-201ENST00000583098 95 ntBASIC3.01□□□□□ -1.93
RGPD3A6NKT7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.01□□□□□ -1.93
RGPD3A6NKT7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
RGPD3A6NKT7 AC069528.2-201ENST00000624849 1991 ntBASIC3.01□□□□□ -1.93
RGPD3A6NKT7 RLIMP2-201ENST00000427891 1563 ntBASIC3.01□□□□□ -1.93
RGPD3A6NKT7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RGPD3A6NKT7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RGPD3A6NKT7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3□□□□□ -1.93
RGPD3A6NKT7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
RGPD3A6NKT7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3□□□□□ -1.93
RGPD3A6NKT7 SNORD6-201ENST00000365444 73 ntBASIC3□□□□□ -1.93
RGPD3A6NKT7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
RGPD3A6NKT7 Y_RNA.466-201ENST00000384294 113 ntBASIC3□□□□□ -1.93
RGPD3A6NKT7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms