Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AP004289.2-201ENST00000444413 1457 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 RNU6-989P-201ENST00000362756 107 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 RNU6-837P-201ENST00000391056 108 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 SNORA68.2-201ENST00000391263 128 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AL590004.1-201ENST00000405321 300 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 RNU2-36P-201ENST00000410361 191 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 RPL21P24-201ENST00000413752 448 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AF228730.4-201ENST00000421457 183 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AL732292.1-201ENST00000426692 226 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 CALM2P2-201ENST00000428512 440 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC005534.2-201ENST00000431047 433 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 HMGB1P18-201ENST00000438801 619 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AL590639.1-201ENST00000456484 337 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC079168.1-201ENST00000458741 345 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 RNU6-329P-201ENST00000459618 107 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 HMGB1P25-201ENST00000468402 607 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 RPS15AP36-201ENST00000492022 382 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 RPL7P23-201ENST00000493874 747 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 RPL23AP55-201ENST00000498163 452 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 MRPS33P2-201ENST00000507850 322 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC093840.1-201ENST00000511599 336 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AP001880.2-201ENST00000538233 448 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC034105.4-201ENST00000568304 277 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 MIR4429-201ENST00000580105 73 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC023575.1-201ENST00000580510 358 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC012443.1-201ENST00000605605 231 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 PART1_1.1-201ENST00000611761 217 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 SNHG22-203ENST00000617833 660 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC025034.2-201ENST00000623264 286 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC034229.5-201ENST00000624258 185 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC011944.2-201ENST00000624440 683 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 AC073869.8-201ENST00000641806 335 ntBASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.06□□□□□ -1.44
TMEM88BA6NKF7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 OR4F13P-202ENST00000560066 2054 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AL034549.2-201ENST00000618285 3373 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 Y_RNA.373-201ENST00000365600 103 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 RNU6-1227P-201ENST00000383981 107 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 RNU1-136P-201ENST00000384181 164 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 Y_RNA.530-201ENST00000384587 101 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 RPL32P23-201ENST00000397237 405 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 Y_RNA.615-201ENST00000410769 117 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 UBE2FP1-201ENST00000416536 447 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 MRPS21P2-201ENST00000424704 264 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AL590399.6-201ENST00000446396 307 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AC006427.1-201ENST00000514359 712 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 RNU6-1153P-201ENST00000516760 105 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AC133555.2-201ENST00000550213 292 ntBASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.05□□□□□ -1.44
TMEM88BA6NKF7 AP001350.1-201ENST00000601906 1524 ntBASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TMEM88BA6NKF7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms