Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 SNRPGP15-201ENST00000600149 222 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 AL355816.1-201ENST00000607951 118 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 MIR8057-201ENST00000620957 69 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 MIR1291-201ENST00000627649 87 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 RNU6-859P-201ENST00000362728 107 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 SNORA44-201ENST00000384584 132 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 MIR518C-201ENST00000384822 101 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AL139039.1-201ENST00000401900 692 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 RNU6-1077P-201ENST00000410506 102 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 FCF1P1-201ENST00000432690 571 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 RPS15AP7-201ENST00000439294 405 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AC104389.3-201ENST00000445629 235 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 BX510359.1-201ENST00000456973 237 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AC004263.1-201ENST00000479327 332 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 RPL37P25-201ENST00000507308 276 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 SNORA31.1-201ENST00000515993 133 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 SNORA31.5-201ENST00000516190 133 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 MTCYBP41-201ENST00000528913 1123 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 CENPUP2-201ENST00000555897 1186 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 ACTR3BP3-201ENST00000565577 979 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AC093732.2-201ENST00000607950 274 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AC012314.7-201ENST00000619693 93 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AC034229.5-201ENST00000624258 185 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 MTCO1P6-201ENST00000481192 1384 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 AC096656.1-201ENST00000623826 1364 ntBASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
TCRBV3S1A0A5B6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AL359511.1-201ENST00000402970 211 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 MTND4P11-201ENST00000417020 1058 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 CKS1BP5-201ENST00000434172 273 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC034159.1-201ENST00000513885 583 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC022080.3-201ENST00000544433 482 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AL391156.1-201ENST00000554965 554 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 MYL12BP1-201ENST00000569826 507 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC013562.2-201ENST00000611632 603 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AP004607.9-201ENST00000618202 316 ntBASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV3S1A0A5B6 AC116096.1-201ENST00000566804 2314 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 Y_RNA.126-201ENST00000363382 111 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 SNORA51.11-201ENST00000384442 131 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 MIR320B1-201ENST00000390209 79 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AL356057.2-201ENST00000403318 432 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AL591416.1-201ENST00000404015 867 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 HMGB3P2-201ENST00000411913 584 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 AJ239321.1-201ENST00000424255 564 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 RPL21P66-201ENST00000426566 466 ntBASIC2.17□□□□□ -2.06
TCRBV3S1A0A5B6 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms