Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRBV4-1A0A0J9YWV2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.39□□□□□ -1.87
TRBV4-1A0A0J9YWV2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC097714.1-201ENST00000511272 1647 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL121657.1-201ENST00000327215 531 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNA5SP42-201ENST00000364278 115 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RPL7P30-201ENST00000420888 709 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC092832.1-201ENST00000422934 400 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 GLRXP1-201ENST00000423261 334 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MTND4P20-201ENST00000424125 869 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 EZH2P1-201ENST00000431167 291 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL591503.2-201ENST00000442314 1005 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 SETD6P1-201ENST00000444575 317 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 EEF1E1P1-201ENST00000446998 430 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RPL23AP35-201ENST00000451906 501 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC099563.1-201ENST00000456086 418 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 SUMO2P2-201ENST00000456482 255 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RPS20P24-201ENST00000457473 361 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC010618.1-201ENST00000469924 477 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RPL7P19-201ENST00000469948 618 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC104685.1-201ENST00000502445 371 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 PCBP2P3-201ENST00000509726 843 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LTV1P1-201ENST00000510683 1237 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNA5SP309-201ENST00000516670 106 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL121766.1-201ENST00000547436 487 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AP000811.1-201ENST00000603803 651 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNVU1-4-201ENST00000612985 164 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 U73479.1-201ENST00000618062 168 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 U7.8-201ENST00000619968 63 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC022079.1-201ENST00000621546 602 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AP000676.3-201ENST00000623299 569 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC079248.2-201ENST00000623779 326 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC087359.1-201ENST00000508335 1740 ntBASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC106871.1-201ENST00000568324 3102 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-462P-201ENST00000362659 105 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 Y_RNA.169-201ENST00000363745 96 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-213P-201ENST00000384051 104 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-952P-201ENST00000391164 108 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL136116.1-201ENST00000403591 381 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNA5SP317-201ENST00000410176 116 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNA5SP311-201ENST00000411290 116 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL365203.2-201ENST00000423444 196 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC006989.1-201ENST00000427212 131 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 PSMA6P3-201ENST00000428242 164 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MRPS18BP2-201ENST00000434310 759 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MUPP-201ENST00000438111 566 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC005297.2-201ENST00000450430 606 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MRPS31P2-201ENST00000451581 518 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 UBDP1-202ENST00000457888 382 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MEMO1P3-201ENST00000459811 302 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RPL31P50-201ENST00000471002 296 ntBASIC3.37□□□□□ -1.87
TRBV4-1A0A0J9YWV2 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms