Protein–RNA interactions for Protein: Q9Y5W8

SNX13, Sorting nexin-13, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13Q9Y5W8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SNX13Q9Y5W8 AC012020.1-201ENST00000624541 1728 ntBASIC4.32□□□□□ -1.72
SNX13Q9Y5W8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SNX13Q9Y5W8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SNX13Q9Y5W8 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX13Q9Y5W8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC011266.1-201ENST00000624119 3569 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 RNU1-15P-201ENST00000353977 144 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 U8.3-201ENST00000363321 132 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 U8.4-201ENST00000363626 134 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 SNORD74.4-201ENST00000364129 80 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 RNA5SP235-201ENST00000365411 114 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 RPL23AP48-201ENST00000406913 488 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 RN7SKP177-201ENST00000410567 355 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 RNU2-66P-201ENST00000410650 161 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 CCDC58P2-201ENST00000417131 366 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 ZNF885P-201ENST00000420174 1098 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 NANOGP6-201ENST00000429190 847 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 OR4K11P-201ENST00000431829 904 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC009961.2-201ENST00000435771 251 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 TPT1P14-201ENST00000448018 505 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 GAPDHP17-201ENST00000449858 1001 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 ISCUP1-201ENST00000454451 448 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 RPS5P7-201ENST00000456664 608 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 S100A11P1-201ENST00000477525 312 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC093278.1-201ENST00000494700 600 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC078918.1-201ENST00000498515 228 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 MTND2P33-201ENST00000506452 1031 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 RNA5SP92-201ENST00000516437 110 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC103783.1-201ENST00000520506 373 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 OR4T1P-201ENST00000554933 911 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 MIR4489-201ENST00000578869 62 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 MIR3118-1-201ENST00000581787 76 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC091805.2-201ENST00000603848 235 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC009268.2-201ENST00000621925 457 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AC112204.3-201ENST00000623822 332 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 AL159972.1-201ENST00000625150 448 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 MTCO1P9-201ENST00000505577 1534 ntBASIC4.31□□□□□ -1.72
SNX13Q9Y5W8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AL157700.1-201ENST00000561973 1432 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 SNORD3H-201ENST00000384486 214 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AL645733.1-201ENST00000402250 217 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 HMGB3P23-201ENST00000414981 585 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 CHEK2P3-201ENST00000416118 248 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 MTCO3P12-201ENST00000416718 547 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AL589872.1-201ENST00000426602 288 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AL353748.1-201ENST00000440753 474 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AL121877.1-201ENST00000453704 622 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AURKAPS2-201ENST00000454983 333 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 MTND1P3-201ENST00000484956 952 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 RPL7P24-201ENST00000493052 752 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AC096751.1-202ENST00000502691 1067 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 CDC42P4-201ENST00000510507 563 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 Y_RNA.672-201ENST00000516289 104 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 RN7SKP66-201ENST00000516681 231 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 SNORA18.6-201ENST00000516792 115 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 RNU2-46P-201ENST00000517038 113 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AC107934.1-201ENST00000522215 217 ntBASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.3□□□□□ -1.72
SNX13Q9Y5W8 AC022832.1-201ENST00000530718 645 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms