Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 MTND4LP26-201ENST00000518144 282 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AP001781.1-201ENST00000530977 207 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AP003122.4-201ENST00000530980 758 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC024224.1-201ENST00000538284 609 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 EEF1B2P4-201ENST00000551398 348 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC009101.1-201ENST00000568135 242 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 MIR3913-1-201ENST00000577744 102 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 RN7SL690P-201ENST00000582087 240 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AP000843.1-201ENST00000624880 701 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 BMS1P21-201ENST00000634565 365 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC022893.2-201ENST00000564832 3296 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 SNORD113.2-201ENST00000364166 89 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 SNORA70F-201ENST00000384142 135 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 RPS23P10-201ENST00000416185 486 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 C1DP2-201ENST00000418167 426 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 RPL36AP36-201ENST00000418616 301 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 PSMA2P3-201ENST00000429685 675 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AL359265.2-201ENST00000434367 631 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 RPL17P49-201ENST00000443728 411 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 CEACAMP6-201ENST00000452007 574 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 RPS20P24-201ENST00000457473 361 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AC053481.1-201ENST00000467217 306 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 HIGD1AP3-201ENST00000515857 278 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 RNU6-430P-201ENST00000517078 107 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 IGKV2D-36-201ENST00000518643 226 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 ZNF519P2-201ENST00000557032 169 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AL157394.1-201ENST00000562983 1224 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 MIR4480-201ENST00000582492 71 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AL161729.4-201ENST00000604650 476 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 RNU6-87P-201ENST00000607561 108 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 FAM25E-202ENST00000608562 189 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 U4.5-201ENST00000617137 123 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AL023881.1-201ENST00000621088 301 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 AL160394.1-201ENST00000624765 724 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 PISRT1-201ENST00000626175 531 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 OR5AK4P-201ENST00000635912 903 ntBASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PCDHA3Q9Y5H8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
PCDHA3Q9Y5H8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AL049555.1-201ENST00000562834 1933 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC095050.2-201ENST00000510748 1458 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 Y_RNA.234-201ENST00000364409 97 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 RN7SKP226-201ENST00000364912 300 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 RNU6-339P-201ENST00000384310 107 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 SNORA70E-201ENST00000384492 135 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 SNORD66.1-201ENST00000391230 76 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 FCF1P10-201ENST00000407590 479 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AL359704.1-201ENST00000411586 781 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AL139095.3-201ENST00000419672 1203 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 EIF1P1-201ENST00000421436 341 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms