Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 OR5BC1P-201ENST00000529327 739 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC068587.4-201ENST00000533893 186 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AL352979.3-201ENST00000553515 247 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 MIR4286-201ENST00000580651 93 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 MIR4637-201ENST00000582405 84 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC022916.3-201ENST00000592961 742 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC008638.3-201ENST00000603341 463 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 BNIP3P11-201ENST00000603878 563 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC108747.1-201ENST00000609508 535 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 U6atac.1-201ENST00000616025 117 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 AC116165.2-201ENST00000616705 206 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX2IPQ9Y2D8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 RNU1-14P-201ENST00000362759 152 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 RNU5F-6P-201ENST00000362979 116 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 DSTNP4-201ENST00000399472 474 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 MTCYBP36-201ENST00000404146 440 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AL133384.1-201ENST00000412744 351 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC109780.2-201ENST00000413467 845 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AL031736.2-201ENST00000426573 787 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC010975.2-201ENST00000427781 588 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 SNRPEP7-201ENST00000438350 220 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 RPL23AP81-201ENST00000455252 467 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC091564.1-201ENST00000464563 479 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 RPL9P33-201ENST00000484311 566 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 FABP5P5-201ENST00000515537 406 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC025881.1-201ENST00000518851 512 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AP002453.2-201ENST00000533503 320 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 MIR4716-201ENST00000579628 84 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 MIR548AB-201ENST00000584917 84 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 AP000403.1-201ENST00000603349 851 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 MIR4727-201ENST00000622232 55 ntBASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SSX2IPQ9Y2D8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 RNA5SP307-201ENST00000362863 116 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 RNU1-63P-201ENST00000383902 164 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 RNU6-921P-201ENST00000384361 107 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 MIR649-201ENST00000384843 97 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 HMGB1P17-201ENST00000403495 628 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 RPL31P52-201ENST00000407532 367 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AL157831.1-201ENST00000426134 473 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 CEACAMP1-201ENST00000434624 1035 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 RPL37P21-201ENST00000435890 276 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 YWHAZP8-201ENST00000436935 731 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 RPS26P56-201ENST00000444468 240 ntBASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX2IPQ9Y2D8 AP000893.1-201ENST00000474462 794 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms