Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 IGHV3-29-201ENST00000604817 344 ntBASIC4□□□□□ -1.77
NPC1L1Q9UHC9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4□□□□□ -1.77
NPC1L1Q9UHC9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 MTCO1P6-201ENST00000481192 1384 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AL645568.2-201ENST00000432815 1337 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC000403.1-201ENST00000613696 3585 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AL512646.1-201ENST00000269395 1077 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 RNA5SP126-201ENST00000365092 109 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 DNAJC19P6-201ENST00000401853 280 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC092185.1-201ENST00000491371 97 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 RN7SKP96-201ENST00000516948 297 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 MTND2P7-201ENST00000521337 640 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC092451.2-201ENST00000538746 658 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AL442163.2-201ENST00000553912 710 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC015871.2-201ENST00000603605 948 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC018926.1-201ENST00000616335 435 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC018926.3-201ENST00000618841 406 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AP000943.4-201ENST00000622912 357 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC073055.1-201ENST00000456901 1621 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 AC025125.1-201ENST00000624743 1922 ntBASIC3.99□□□□□ -1.77
NPC1L1Q9UHC9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 AL672296.1-201ENST00000427780 2158 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 RNA5SP391-201ENST00000363456 119 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 UBE2V1P5-201ENST00000440070 405 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 HMGB1P48-201ENST00000446155 598 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 GTF2IP12-201ENST00000456547 356 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 AC016550.1-201ENST00000505348 785 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 AC005351.1-201ENST00000511152 786 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 AC009812.2-201ENST00000517657 457 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 VN1R88P-201ENST00000596787 292 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 MIR6864-201ENST00000617935 70 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 AC106730.3-201ENST00000624568 641 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 AP000720.1-201ENST00000625091 483 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 XPOTP1-201ENST00000443317 2398 ntBASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPC1L1Q9UHC9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 AL445183.3-201ENST00000414168 502 ntBASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 UBE2V1P6-201ENST00000430840 422 ntBASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 AL096803.2-201ENST00000450032 677 ntBASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 HMGB3P30-201ENST00000457863 606 ntBASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 AC004924.1-201ENST00000480160 781 ntBASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 AC117522.3-201ENST00000507974 584 ntBASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 SERPINE4P-201ENST00000554978 281 ntBASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 LLPHP1-201ENST00000603571 367 ntBASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 AP005229.2-201ENST00000609980 697 ntBASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.97□□□□□ -1.77
NPC1L1Q9UHC9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.96□□□□□ -1.77
NPC1L1Q9UHC9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 RN7SKP284-201ENST00000411002 343 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AC069218.2-201ENST00000411665 344 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 DEFB130D-201ENST00000426866 237 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 USP9YP7-201ENST00000436723 430 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AL158053.1-201ENST00000441503 453 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 HSFY3P-201ENST00000444242 1191 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 USP9YP32-201ENST00000452432 430 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms