Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC017071.1-201ENST00000564407 2204 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 RNU6-374P-201ENST00000364146 108 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 MIR184-201ENST00000384962 84 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AL357075.1-201ENST00000404107 726 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AL133264.1-201ENST00000407157 562 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AL023807.1-201ENST00000407932 359 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 RN7SKP285-201ENST00000410137 318 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC126124.2-201ENST00000413542 321 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 FCF1P2-201ENST00000415284 583 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC002075.2-201ENST00000425207 252 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC241584.1-201ENST00000438469 1241 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 TVP23BP2-201ENST00000455082 615 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 DYNLL1P6-201ENST00000503440 264 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 RN7SKP116-201ENST00000516902 319 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC107934.2-201ENST00000518653 310 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AP000790.1-201ENST00000528891 737 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 MTND5P21-201ENST00000531961 522 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 RPL21P12-201ENST00000559810 515 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC107954.1-201ENST00000565906 727 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 TMF1P1-201ENST00000576058 373 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 SNORD39.3-201ENST00000584451 71 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 GAS5-AS1-201ENST00000602767 694 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC006254.3-201ENST00000603353 884 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC018754.1-201ENST00000607486 925 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC009464.1-201ENST00000615731 469 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AL109620.1-201ENST00000618738 1197 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AL356321.1-201ENST00000621360 228 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AL049777.1-201ENST00000622740 518 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AP003485.1-201ENST00000625093 753 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 RIOK3P1-201ENST00000418778 1528 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 ZNF37BP-203ENST00000452306 1352 ntBASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLCF1Q9UBD9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 RNU6-251P-201ENST00000363235 104 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 MIR217-201ENST00000384817 110 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AL121972.1-201ENST00000402023 252 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AL133384.1-201ENST00000412744 351 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC063979.1-201ENST00000415539 377 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 EI24P1-201ENST00000416584 867 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC244098.2-201ENST00000422068 99 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 RPS6P14-201ENST00000425165 719 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 Z93242.1-201ENST00000427102 353 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC005345.1-201ENST00000431868 217 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 RPL23AP16-201ENST00000441715 421 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 MTCYBP42-201ENST00000444653 1130 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC115115.1-201ENST00000449927 248 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC104073.1-201ENST00000451988 151 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 TRBV26-201ENST00000456572 344 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 CFTRP1-201ENST00000456646 183 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 MTCO3P2-201ENST00000457365 171 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 RPL6P9-201ENST00000466502 859 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 SYPL1P1-201ENST00000473622 768 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC010301.1-201ENST00000473936 355 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC078785.3-201ENST00000476607 425 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC078918.1-201ENST00000498515 228 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 BOLA3P3-201ENST00000505182 232 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC005921.1-201ENST00000510589 286 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 PHBP14-201ENST00000512887 367 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms