Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC090617.7-201ENST00000623952 126 ntBASIC2.85□□□□□ -1.95
VAPAQ9P0L0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VAPAQ9P0L0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 RNU6-796P-201ENST00000391086 107 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 RPL7P8-201ENST00000411964 730 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 HSPE1P1-201ENST00000421494 318 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC097713.2-201ENST00000430199 356 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 CYCSP35-201ENST00000451978 304 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC109925.1-201ENST00000478069 331 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC068724.1-201ENST00000487100 792 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 OR5H5P-201ENST00000503164 928 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC022069.1-201ENST00000582910 658 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AP001029.3-201ENST00000588063 596 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC006116.7-201ENST00000590141 756 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AL031985.2-201ENST00000600955 480 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC092474.3-201ENST00000603022 568 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC128687.1-201ENST00000605304 619 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC016542.1-201ENST00000608259 493 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC231759.1-201ENST00000616455 597 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 AC092650.2-201ENST00000619984 902 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 MIR622-201ENST00000638396 96 ntBASIC2.84□□□□□ -1.95
VAPAQ9P0L0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.84□□□□□ -1.95
VAPAQ9P0L0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.84□□□□□ -1.96
VAPAQ9P0L0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 RNU6-883P-201ENST00000384597 107 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 RNA5SP344-201ENST00000411081 104 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 RPS7P15-201ENST00000415804 584 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AL451074.5-201ENST00000415894 435 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 MORF4L1P7-201ENST00000426038 703 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 RPP40P1-201ENST00000426762 456 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC006548.1-201ENST00000427470 102 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AL159987.2-201ENST00000432754 307 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 RPS29P6-201ENST00000438196 145 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 RPL21P2-201ENST00000440049 481 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 COX6CP2-201ENST00000444980 225 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 PDSS1P2-201ENST00000449397 678 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC140076.1-201ENST00000449897 361 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AL590639.1-201ENST00000456484 337 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 COX6CP3-201ENST00000580869 223 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 BNIP3P4-201ENST00000604946 565 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC008962.1-201ENST00000605729 304 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AL163051.2-201ENST00000618976 735 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC095031.1-201ENST00000623685 672 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC097372.4-201ENST00000625025 466 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 CR381572.1-201ENST00000625098 102 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC084035.1-201ENST00000634543 607 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 AC139713.2-210ENST00000641741 992 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
VAPAQ9P0L0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
VAPAQ9P0L0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VAPAQ9P0L0 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VAPAQ9P0L0 AC025750.1-201ENST00000399891 379 ntBASIC2.82□□□□□ -1.96
VAPAQ9P0L0 SNORA11B-201ENST00000408175 129 ntBASIC2.82□□□□□ -1.96
VAPAQ9P0L0 U3.42-201ENST00000408746 214 ntBASIC2.82□□□□□ -1.96
VAPAQ9P0L0 RPL7P10-201ENST00000417407 739 ntBASIC2.82□□□□□ -1.96
VAPAQ9P0L0 FNDC3CP-201ENST00000420795 1155 ntBASIC2.82□□□□□ -1.96
VAPAQ9P0L0 AL139281.1-201ENST00000422120 335 ntBASIC2.82□□□□□ -1.96
VAPAQ9P0L0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.82□□□□□ -1.96
VAPAQ9P0L0 UBE2D3P2-201ENST00000424409 445 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms