Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 SOD1P3-201ENST00000518682 454 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC022695.1-201ENST00000522089 237 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC087373.1-201ENST00000524920 491 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 OR5D17P-201ENST00000531492 978 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AP004242.1-201ENST00000533701 349 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 ELOCP32-201ENST00000548625 324 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL845331.3-202ENST00000562856 261 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 MIR4284-201ENST00000578924 81 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 OR4K7P-201ENST00000580232 945 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 SNORD39.3-201ENST00000584451 71 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC103881.1-201ENST00000603476 538 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC018638.7-201ENST00000605836 1114 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 RNU4-89P-201ENST00000607443 133 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC005332.6-201ENST00000613178 446 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC114781.5-201ENST00000615297 108 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL607023.1-201ENST00000620045 248 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL512506.2-201ENST00000624472 458 ntBASIC3.48□□□□□ -1.85
NDE1Q9NXR1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NDE1Q9NXR1 AC107982.1-201ENST00000507171 1300 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC021755.1-201ENST00000559747 1447 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AL356131.1-201ENST00000405826 414 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC004022.2-201ENST00000413824 193 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC009518.2-201ENST00000418056 731 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 RPL31P45-201ENST00000419532 356 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AL513174.1-201ENST00000423182 629 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 NEK4P1-201ENST00000433383 879 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 RPS25P9-201ENST00000435591 252 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AL356276.2-201ENST00000435919 558 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 RPL23AP22-201ENST00000437556 453 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 CYCSP43-201ENST00000438233 310 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 OR9M1P-201ENST00000459641 921 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 BET1P1-201ENST00000482276 359 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 SNORA70.19-201ENST00000516717 90 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC068657.1-201ENST00000520807 306 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AP003730.1-201ENST00000524605 285 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AP000790.1-201ENST00000528891 737 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 PARP1P2-201ENST00000556806 195 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AL109653.1-201ENST00000603091 248 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 MIR6758-201ENST00000620653 63 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC098679.5-201ENST00000624394 571 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 AC007496.3-201ENST00000624987 3443 ntBASIC3.47□□□□□ -1.85
NDE1Q9NXR1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NDE1Q9NXR1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
NDE1Q9NXR1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
NDE1Q9NXR1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
NDE1Q9NXR1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 XPOTP1-201ENST00000443317 2398 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC004972.1-201ENST00000623934 2209 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 RNA5SP505-201ENST00000364748 108 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms