Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 A2MP1-204ENST00000566278 4130 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC099654.2-201ENST00000433031 1980 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 RNU4-1-201ENST00000363925 141 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 RNU6-1078P-201ENST00000364522 103 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 RNA5SP151-201ENST00000365632 117 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 MIR3074-201ENST00000384885 81 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AL583834.1-201ENST00000406943 343 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 RN7SKP206-201ENST00000410823 293 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC127391.1-201ENST00000411737 98 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 NPM1P4-201ENST00000414095 812 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC019097.1-201ENST00000424783 735 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 RPL31P35-201ENST00000431058 377 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 RPS17P13-201ENST00000448974 407 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 OR2AO1P-201ENST00000476497 403 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC008897.1-201ENST00000494006 347 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 Vault.3-201ENST00000516676 95 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC091178.1-203ENST00000584586 279 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC022726.1-201ENST00000587475 207 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 HMGN2P28-201ENST00000606102 262 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC090948.1-201ENST00000607464 549 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AP001521.2-201ENST00000608772 546 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AL161734.1-201ENST00000609720 557 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AL133173.2-201ENST00000614270 90 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 RMST_9.1-201ENST00000619945 193 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC009268.2-201ENST00000621925 457 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC124864.2-201ENST00000624736 186 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AC055839.1-201ENST00000634467 498 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 AL138713.1-201ENST00000624026 2130 ntBASIC4.66□□□□□ -1.66
MKS1Q9NXB0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MKS1Q9NXB0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
MKS1Q9NXB0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
MKS1Q9NXB0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.65□□□□□ -1.66
MKS1Q9NXB0 AC090337.1-201ENST00000579651 2074 ntBASIC4.65□□□□□ -1.66
MKS1Q9NXB0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
MKS1Q9NXB0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 OR4G2P-201ENST00000328113 903 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 RN7SKP160-201ENST00000363804 340 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 RNA5SP513-201ENST00000364648 118 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 RNY4P16-201ENST00000364768 94 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 RNA5SP455-201ENST00000365190 119 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 MIR19A-201ENST00000384878 82 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 U3.25-201ENST00000391209 220 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 CYB5AP4-201ENST00000396692 399 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 RNU6-712P-201ENST00000410558 100 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 RN7SKP167-201ENST00000411047 285 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 RN7SKP216-201ENST00000411050 312 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 ISCA1P1-201ENST00000426679 387 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC010655.1-201ENST00000449336 292 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 C1DP4-201ENST00000455429 424 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 UBDP1-202ENST00000457888 382 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 SNORD108-201ENST00000459332 71 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 RPS26P28-201ENST00000470806 348 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 COPS8P2-201ENST00000473228 627 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC135001.1-201ENST00000544546 283 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC092490.3-201ENST00000545370 572 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC124947.2-202ENST00000552735 133 ntBASIC4.65□□□□□ -1.67
MKS1Q9NXB0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms