Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 CENPCP1-201ENST00000533085 2578 ntBASIC1.86□□□□□ -2.11
SMCO4Q9NRQ5 SAGE4P-201ENST00000442271 3381 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 KPNA2P1-201ENST00000458289 1591 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AC096533.1-201ENST00000411645 353 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AL645937.1-202ENST00000421799 937 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 Z75741.1-201ENST00000446793 314 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 RPL5P24-201ENST00000463742 885 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 HPRT1P1-201ENST00000509498 657 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 MIR514B-201ENST00000516774 80 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AC009127.3-201ENST00000570531 403 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 MIR5680-201ENST00000577577 84 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 RN7SL753P-201ENST00000581238 290 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AC061975.8-201ENST00000587058 721 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AL606834.2-201ENST00000602954 668 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AC008962.1-201ENST00000605729 304 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AC067747.1-201ENST00000608026 250 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 AC245884.12-201ENST00000615364 59 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 uc_338.9-201ENST00000617424 182 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 MIR6758-201ENST00000620653 63 ntBASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SMCO4Q9NRQ5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 RNU1-64P-201ENST00000365443 163 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 RNU1-52P-201ENST00000384190 164 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 MIR490-201ENST00000384865 128 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AL355497.1-201ENST00000406262 551 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AC091862.1-201ENST00000438016 1100 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 IFNA11P-201ENST00000446352 526 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AL157827.1-201ENST00000447622 132 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 SBDSP1-204ENST00000453858 737 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AC004263.1-201ENST00000479327 332 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AC008885.1-201ENST00000514930 301 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 RBM7-208ENST00000545678 867 ntTSL 3 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 OR11H5P-201ENST00000554039 926 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AL138976.2-201ENST00000563989 694 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 RPS3AP23-202ENST00000574601 686 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AC090616.5-202ENST00000582111 297 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AC245036.5-201ENST00000596330 847 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.84□□□□□ -2.11
SMCO4Q9NRQ5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SMCO4Q9NRQ5 AC007342.9-201ENST00000623877 1385 ntBASIC1.84□□□□□ -2.12
SMCO4Q9NRQ5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 HMGB1P5-201ENST00000255320 642 ntBASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 TANK-203ENST00000402568 878 ntTSL 5 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 RNA5SP120-201ENST00000410900 112 ntBASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 AC096632.1-201ENST00000427395 310 ntBASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 HMGN2P31-201ENST00000432430 273 ntBASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 UBE2FP3-201ENST00000436366 524 ntBASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 AC025033.1-201ENST00000463883 194 ntBASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 AC109486.1-201ENST00000486833 374 ntBASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 AC008427.1-201ENST00000503102 655 ntBASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 PRELID3BP5-201ENST00000508612 460 ntBASIC1.83□□□□□ -2.12
SMCO4Q9NRQ5 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms