Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.62□□□□□ -1.83
HPS4Q9NQG7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.62□□□□□ -1.83
HPS4Q9NQG7 AC092754.2-201ENST00000463506 460 ntBASIC3.62□□□□□ -1.83
HPS4Q9NQG7 AC004801.2-202ENST00000463559 283 ntBASIC3.62□□□□□ -1.83
HPS4Q9NQG7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.62□□□□□ -1.83
HPS4Q9NQG7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.62□□□□□ -1.83
HPS4Q9NQG7 SCARNA13-201ENST00000516672 275 ntBASIC3.62□□□□□ -1.83
HPS4Q9NQG7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.62□□□□□ -1.83
HPS4Q9NQG7 MTCO3P15-201ENST00000526563 574 ntBASIC3.62□□□□□ -1.83
HPS4Q9NQG7 MTCYBP41-201ENST00000528913 1123 ntBASIC3.62□□□□□ -1.83
HPS4Q9NQG7 AL845331.3-202ENST00000562856 261 ntBASIC3.62□□□□□ -1.83
HPS4Q9NQG7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.62□□□□□ -1.83
HPS4Q9NQG7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.62□□□□□ -1.83
HPS4Q9NQG7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.62□□□□□ -1.83
HPS4Q9NQG7 AC011468.4-201ENST00000603942 409 ntBASIC3.62□□□□□ -1.83
HPS4Q9NQG7 AP003973.1-201ENST00000604639 691 ntBASIC3.62□□□□□ -1.83
HPS4Q9NQG7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HPS4Q9NQG7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
HPS4Q9NQG7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HPS4Q9NQG7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 FRG1CP-201ENST00000358464 769 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 RNU6-374P-201ENST00000364146 108 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 SNORA48.2-201ENST00000390926 124 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 RN7SKP285-201ENST00000410137 318 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 RN7SKP53-201ENST00000411337 315 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 OR1AA1P-201ENST00000419597 916 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 OFD1P18Y-201ENST00000420889 959 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 Z93242.1-201ENST00000427102 353 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 RPL31P54-201ENST00000429803 370 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AC005345.1-201ENST00000431868 217 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 VDAC1P3-201ENST00000434069 851 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 RPS29P31-201ENST00000446147 164 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 SLC31A1P1-201ENST00000451221 567 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 NPM1P13-201ENST00000452663 865 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 BTF3P5-201ENST00000457252 467 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 DYNLL1P6-201ENST00000503440 264 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 RNU6-1028P-201ENST00000517164 93 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 IGKV2-26-201ENST00000518305 343 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 RPL12P22-201ENST00000519073 490 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AC019227.1-201ENST00000526902 510 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 SYF2P1-201ENST00000550658 413 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 GTF2IP8-201ENST00000560687 584 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AC012182.1-201ENST00000570133 895 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 MIR7112-201ENST00000616126 65 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AP003355.3-201ENST00000623465 114 ntBASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HPS4Q9NQG7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 ZNF833P-201ENST00000424938 1494 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 ANKRD36P1-201ENST00000344424 659 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 RNU6-600P-201ENST00000362524 99 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 AL133264.1-201ENST00000407157 562 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 HSFY1P1-201ENST00000423928 1178 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 RPF2P1-201ENST00000424137 906 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 C1DP1-201ENST00000426049 402 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 RNF2P1-201ENST00000442955 1010 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 MTCYBP42-201ENST00000444653 1130 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 COX6CP18-201ENST00000448769 222 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 RPL7P52-201ENST00000449200 742 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 AC104073.1-201ENST00000451988 151 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 AC017015.1-201ENST00000477387 286 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 RPS29P2-201ENST00000479278 136 ntBASIC3.6□□□□□ -1.83
HPS4Q9NQG7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.6□□□□□ -1.83
HPS4Q9NQG7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms