Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 SLC31A1P1-201ENST00000451221 567 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 NDUFA5P7-201ENST00000452914 242 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 RNU7-140P-201ENST00000459546 60 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 SNORA64.4-201ENST00000516632 81 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 RNU6-1073P-201ENST00000517182 106 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 RN7SKP289-201ENST00000517244 295 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 ZNF705CP-201ENST00000530515 889 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC006518.2-201ENST00000542513 940 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 MIR3690-201ENST00000580266 75 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AP001542.2-201ENST00000593141 364 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL031985.2-201ENST00000600955 480 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL020997.3-201ENST00000602843 359 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL162713.1-201ENST00000604480 262 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 BNIP3P19-201ENST00000605397 577 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC120053.1-201ENST00000607706 736 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL136370.1-201ENST00000608166 691 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL133445.2-201ENST00000611191 527 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC018926.1-201ENST00000616335 435 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL138960.2-201ENST00000625145 535 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC004925.1-201ENST00000624256 2706 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 MTND5P1-201ENST00000445440 1375 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 RNA5SP383-201ENST00000362934 120 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 SNORD56.3-201ENST00000363507 71 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 RNU6-353P-201ENST00000364266 108 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 U3.11-201ENST00000364476 212 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 TAF13P2-201ENST00000416876 286 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 OR1AA1P-201ENST00000419597 916 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 MTCO2P1-201ENST00000424648 477 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 MTCYBP31-201ENST00000438855 1122 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 RPL23AP16-201ENST00000441715 421 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AL096829.2-201ENST00000446582 742 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 ELOCP23-201ENST00000452014 332 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AC010468.1-201ENST00000461022 817 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AC092754.2-201ENST00000463506 460 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 RPS4XP10-201ENST00000465034 731 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AC015908.1-201ENST00000478739 476 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 RNU5A-7P-201ENST00000515979 116 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 RNA5SP135-201ENST00000517019 125 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 MIR2682-201ENST00000580305 110 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 CKS1BP3-201ENST00000600888 237 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AC025588.3-201ENST00000604182 274 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AC096577.2-201ENST00000611455 153 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 PLCE1P1-201ENST00000622094 305 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AL512506.2-201ENST00000624472 458 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 MIR7153-201ENST00000637758 57 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 BX649567.1-201ENST00000642071 1134 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 AF117829.1-206ENST00000621883 3802 ntBASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCSER1Q9C0I3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCSER1Q9C0I3 OR1L1-202ENST00000373686 1083 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms