Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC025263.3-201ENST00000622965 1396 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 RNA5SP258-201ENST00000362750 119 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 RNA5SP387-201ENST00000364226 106 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 SNORA9-201ENST00000384215 133 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 RPL23AP82-202ENST00000427528 469 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC005300.1-201ENST00000428401 373 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC092170.1-201ENST00000440211 356 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 ATP5C1P1-201ENST00000441945 895 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AL034418.1-201ENST00000448675 860 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 RPL36AP33-201ENST00000450395 310 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 CENPBD1P1-201ENST00000464061 469 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC010301.1-201ENST00000473936 355 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 MTCO3P44-201ENST00000510977 541 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 SNORA70.24-201ENST00000517233 118 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AL121603.1-201ENST00000553815 142 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC095057.3-201ENST00000567102 1157 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 MIR5680-201ENST00000577577 84 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC067852.3-201ENST00000589177 561 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC025588.3-201ENST00000604182 274 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AC096586.1-201ENST00000610267 561 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 VIS1.1-201ENST00000610517 203 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AL354976.1-201ENST00000613843 387 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AL442067.2-201ENST00000614033 363 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 AL157817.1-201ENST00000614264 790 ntBASIC2.28□□□□□ -2.04
UPK3BQ9BT76 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UPK3BQ9BT76 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.05
UPK3BQ9BT76 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 SNORA51.4-201ENST00000364993 124 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 RNU6-339P-201ENST00000384310 107 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 MIR491-201ENST00000384877 84 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 RPL21P3-201ENST00000395517 478 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AL354719.1-201ENST00000406535 843 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AL591034.1-201ENST00000407447 340 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 HMGN1P24-201ENST00000412282 298 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 BX323014.1-201ENST00000412876 237 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 MORF4L1P7-201ENST00000426038 703 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AC006548.1-201ENST00000427470 102 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 RPL21P40-201ENST00000428586 483 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AC104332.2-201ENST00000429959 156 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AL691517.1-201ENST00000440833 1235 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 RPS26P30-201ENST00000443431 335 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AL590639.1-201ENST00000456484 337 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 BTF3P5-201ENST00000457252 467 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 RPS4XP10-201ENST00000465034 731 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 HMGN2P13-201ENST00000476476 274 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AC017015.1-201ENST00000477387 286 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AC109925.1-201ENST00000478069 331 ntBASIC2.27□□□□□ -2.05
UPK3BQ9BT76 AC021205.2-201ENST00000480069 347 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms