Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.91□□□□□ -1.78
RAD9AQ99638 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
RAD9AQ99638 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RAD9AQ99638 AC117529.2-201ENST00000512159 2068 ntBASIC3.91□□□□□ -1.78
RAD9AQ99638 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.91□□□□□ -1.78
RAD9AQ99638 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RAD9AQ99638 AC027287.1-201ENST00000553115 1453 ntBASIC3.91□□□□□ -1.78
RAD9AQ99638 SEPT7P7-201ENST00000420492 1301 ntBASIC3.91□□□□□ -1.78
RAD9AQ99638 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RAD9AQ99638 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RAD9AQ99638 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RAD9AQ99638 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RAD9AQ99638 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RAD9AQ99638 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RAD9AQ99638 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RAD9AQ99638 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RAD9AQ99638 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RAD9AQ99638 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RAD9AQ99638 GNG5P1-201ENST00000255500 204 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RAD9AQ99638 SNORA48.5-201ENST00000391143 135 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC069218.2-201ENST00000411665 344 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.9□□□□□ -1.79
RAD9AQ99638 AL136133.1-201ENST00000413694 376 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 RPL31P2-201ENST00000413849 377 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 RPS24P7-201ENST00000416921 246 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 ELOCP9-201ENST00000418624 239 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.9□□□□□ -1.79
RAD9AQ99638 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.9□□□□□ -1.79
RAD9AQ99638 RPL7P44-201ENST00000424827 742 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC017083.1-201ENST00000428093 483 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AF228730.2-201ENST00000438784 848 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AL356535.1-201ENST00000440335 398 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.9□□□□□ -1.79
RAD9AQ99638 RPL23AP76-201ENST00000441860 458 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC010655.1-201ENST00000449336 292 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 BX276092.4-201ENST00000452056 248 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 RFC5P1-201ENST00000454419 874 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RAD9AQ99638 AC010307.1-201ENST00000467206 836 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 RPL7P23-201ENST00000493874 747 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 RNF138P1-201ENST00000502765 546 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RAD9AQ99638 NDUFB4P9-201ENST00000511646 388 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC008837.2-201ENST00000513076 418 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC112673.1-201ENST00000513168 575 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 SNORA70.18-201ENST00000516696 98 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 RNU4-60P-201ENST00000517239 135 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 RN7SKP289-201ENST00000517244 295 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC090136.1-201ENST00000520009 240 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RAD9AQ99638 AP001189.2-201ENST00000527320 189 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AP000790.1-201ENST00000528891 737 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 MTCO2P15-201ENST00000532655 656 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC024224.1-201ENST00000538284 609 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.9□□□□□ -1.79
RAD9AQ99638 AC090877.1-201ENST00000561418 344 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AGGF1P8-201ENST00000562979 1000 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC009097.3-201ENST00000563557 1018 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 MIR4644-201ENST00000579929 84 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC061975.8-201ENST00000587058 721 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC107952.2-201ENST00000606048 486 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC092106.3-201ENST00000611308 722 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC107075.1-201ENST00000613695 314 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AC068722.2-201ENST00000618734 544 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AP002782.1-201ENST00000623107 614 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 AP000676.4-201ENST00000624659 623 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.9□□□□□ -1.79
RAD9AQ99638 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
RAD9AQ99638 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.9□□□□□ -1.79
RAD9AQ99638 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
RAD9AQ99638 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.9□□□□□ -1.79
RAD9AQ99638 AP001486.2-201ENST00000561652 5113 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RAD9AQ99638 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.9□□□□□ -1.79
RAD9AQ99638 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RAD9AQ99638 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.9□□□□□ -1.79
RAD9AQ99638 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
RAD9AQ99638 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RAD9AQ99638 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RAD9AQ99638 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RAD9AQ99638 RNU4-35P-201ENST00000362588 141 ntBASIC3.89□□□□□ -1.79
RAD9AQ99638 RNU6-560P-201ENST00000364007 108 ntBASIC3.89□□□□□ -1.79
RAD9AQ99638 AL122016.1-201ENST00000403365 367 ntBASIC3.89□□□□□ -1.79
RAD9AQ99638 MIR1183-201ENST00000408856 89 ntBASIC3.89□□□□□ -1.79
RAD9AQ99638 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.89□□□□□ -1.79
RAD9AQ99638 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.89□□□□□ -1.79
RAD9AQ99638 AC092634.6-201ENST00000418558 192 ntBASIC3.89□□□□□ -1.79
RAD9AQ99638 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.89□□□□□ -1.79
RAD9AQ99638 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.89□□□□□ -1.79
RAD9AQ99638 ATP5HP2-201ENST00000433885 485 ntBASIC3.89□□□□□ -1.79
RAD9AQ99638 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.89□□□□□ -1.79
RAD9AQ99638 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.89□□□□□ -1.79
RAD9AQ99638 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.89□□□□□ -1.79
RAD9AQ99638 HMGN2P7-201ENST00000456186 273 ntBASIC3.89□□□□□ -1.79
RAD9AQ99638 BTF3P5-201ENST00000457252 467 ntBASIC3.89□□□□□ -1.79
RAD9AQ99638 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.89□□□□□ -1.79
RAD9AQ99638 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RAD9AQ99638 AC025518.1-201ENST00000479856 347 ntBASIC3.89□□□□□ -1.79
RAD9AQ99638 RPL31P61-201ENST00000496160 376 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms