Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
VAT1Q99536 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.93□□□□□ -1.94
VAT1Q99536 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VAT1Q99536 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
VAT1Q99536 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VAT1Q99536 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VAT1Q99536 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VAT1Q99536 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VAT1Q99536 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VAT1Q99536 MTND5P7-201ENST00000413558 1798 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
VAT1Q99536 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.92□□□□□ -1.94
VAT1Q99536 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
VAT1Q99536 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VAT1Q99536 MTND4P34-201ENST00000572715 1371 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VAT1Q99536 ENSAP3-201ENST00000312710 333 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VAT1Q99536 SNORA51.12-201ENST00000384448 134 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 SNORA48.5-201ENST00000391143 135 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 RNU2-71P-201ENST00000411395 189 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 AL024507.1-201ENST00000412741 274 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 HMGB3P31-201ENST00000413333 595 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 ARL2BPP3-201ENST00000421226 480 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.92□□□□□ -1.94
VAT1Q99536 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.92□□□□□ -1.94
VAT1Q99536 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.92□□□□□ -1.94
VAT1Q99536 HMGN2P20-201ENST00000437531 273 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 HSPE1P28-201ENST00000443139 211 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.92□□□□□ -1.94
VAT1Q99536 RPL21P18-201ENST00000469899 480 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 AC087879.1-201ENST00000474343 374 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 RPS27AP1-201ENST00000475545 471 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 AC093663.2-201ENST00000484625 313 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 SCGB1D5P-201ENST00000515134 247 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.92□□□□□ -1.94
VAT1Q99536 AF279873.1-201ENST00000523393 313 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 AP004371.1-201ENST00000525240 214 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 AC109635.4-202ENST00000531666 412 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 HPRT1P3-201ENST00000539521 576 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.92□□□□□ -1.94
VAT1Q99536 MIR4325-201ENST00000583049 90 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.92□□□□□ -1.94
VAT1Q99536 AC004775.1-201ENST00000607389 753 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 OR2BH1P-201ENST00000608850 864 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
VAT1Q99536 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.92□□□□□ -1.94
VAT1Q99536 AL356118.1-201ENST00000635272 1078 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 AC017104.5-201ENST00000637647 639 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VAT1Q99536 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
VAT1Q99536 AC046144.1-201ENST00000478559 1853 ntBASIC2.92□□□□□ -1.94
VAT1Q99536 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VAT1Q99536 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
VAT1Q99536 RPL9P7-201ENST00000330965 580 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 MIR26A1-201ENST00000362205 77 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VAT1Q99536 RPS20P5-201ENST00000434808 360 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 AL513043.1-201ENST00000439124 535 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 TRIM60P18-201ENST00000441518 828 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.91□□□□□ -1.94
VAT1Q99536 ELOCP13-201ENST00000443934 329 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 AL671855.1-201ENST00000446875 1203 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 NIPA2P5-201ENST00000452282 464 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.91□□□□□ -1.94
VAT1Q99536 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.91□□□□□ -1.94
VAT1Q99536 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.91□□□□□ -1.94
VAT1Q99536 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.91□□□□□ -1.94
VAT1Q99536 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.91□□□□□ -1.94
VAT1Q99536 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.91□□□□□ -1.94
VAT1Q99536 SNORA9.3-201ENST00000516383 129 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 RN7SKP57-201ENST00000517248 293 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.91□□□□□ -1.94
VAT1Q99536 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.91□□□□□ -1.94
VAT1Q99536 CR383656.14-201ENST00000551951 406 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 AL121603.1-201ENST00000553815 142 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.91□□□□□ -1.94
VAT1Q99536 MIR3605-201ENST00000583214 100 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VAT1Q99536 AC012119.1-201ENST00000603184 222 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VAT1Q99536 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.91□□□□□ -1.94
VAT1Q99536 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.91□□□□□ -1.94
VAT1Q99536 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
VAT1Q99536 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.91□□□□□ -1.94
VAT1Q99536 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.91□□□□□ -1.94
VAT1Q99536 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VAT1Q99536 AL355578.1-201ENST00000607405 1328 ntBASIC2.91□□□□□ -1.94
VAT1Q99536 API5P2-201ENST00000397055 1498 ntBASIC2.9□□□□□ -1.94
VAT1Q99536 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
VAT1Q99536 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.9□□□□□ -1.94
VAT1Q99536 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VAT1Q99536 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VAT1Q99536 SNORD88.1-201ENST00000408684 91 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 SNORA11-201ENST00000408789 128 ntBASIC2.9□□□□□ -1.95
VAT1Q99536 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.9□□□□□ -1.95
VAT1Q99536 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms