Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
IFT140Q96RY7 RNU6-1053P-201ENST00000515930 101 ntBASIC3.91□□□□□ -1.78
IFT140Q96RY7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.91□□□□□ -1.78
IFT140Q96RY7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.91□□□□□ -1.78
IFT140Q96RY7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.91□□□□□ -1.78
IFT140Q96RY7 AC067852.7-201ENST00000623270 535 ntBASIC3.91□□□□□ -1.78
IFT140Q96RY7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
IFT140Q96RY7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.9□□□□□ -1.79
IFT140Q96RY7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
IFT140Q96RY7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
IFT140Q96RY7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
IFT140Q96RY7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.9□□□□□ -1.79
IFT140Q96RY7 RPL23AP14-201ENST00000468281 468 ntBASIC3.9□□□□□ -1.79
IFT140Q96RY7 KCTD9P5-201ENST00000504141 1170 ntBASIC3.9□□□□□ -1.79
IFT140Q96RY7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.9□□□□□ -1.79
IFT140Q96RY7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.9□□□□□ -1.79
IFT140Q96RY7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.9□□□□□ -1.79
IFT140Q96RY7 AC123904.3-201ENST00000547218 814 ntBASIC3.9□□□□□ -1.79
IFT140Q96RY7 AC135628.1-201ENST00000568867 534 ntBASIC3.9□□□□□ -1.79
IFT140Q96RY7 AL022099.1-201ENST00000604551 712 ntBASIC3.9□□□□□ -1.79
IFT140Q96RY7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.9□□□□□ -1.79
IFT140Q96RY7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
IFT140Q96RY7 AL606537.1-201ENST00000607258 2011 ntBASIC3.9□□□□□ -1.79
IFT140Q96RY7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
IFT140Q96RY7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.89□□□□□ -1.79
IFT140Q96RY7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.89□□□□□ -1.79
IFT140Q96RY7 AC090695.1-201ENST00000561269 1222 ntBASIC3.89□□□□□ -1.79
IFT140Q96RY7 AC025281.1-201ENST00000567026 265 ntBASIC3.89□□□□□ -1.79
IFT140Q96RY7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
IFT140Q96RY7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
IFT140Q96RY7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.88□□□□□ -1.79
IFT140Q96RY7 RAD1P1-201ENST00000231383 813 ntBASIC3.88□□□□□ -1.79
IFT140Q96RY7 Y_RNA.508-201ENST00000384502 114 ntBASIC3.88□□□□□ -1.79
IFT140Q96RY7 VN1R17P-201ENST00000472048 1090 ntBASIC3.88□□□□□ -1.79
IFT140Q96RY7 LINC00888-204ENST00000487386 421 ntBASIC3.88□□□□□ -1.79
IFT140Q96RY7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.88□□□□□ -1.79
IFT140Q96RY7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
IFT140Q96RY7 MIR3186-201ENST00000577404 85 ntBASIC3.88□□□□□ -1.79
IFT140Q96RY7 AC067747.1-201ENST00000608026 250 ntBASIC3.88□□□□□ -1.79
IFT140Q96RY7 MTND5P29-201ENST00000458676 1807 ntBASIC3.88□□□□□ -1.79
IFT140Q96RY7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
IFT140Q96RY7 MIR148B-201ENST00000362252 99 ntBASIC3.87□□□□□ -1.79
IFT140Q96RY7 RNU1-17P-201ENST00000363022 152 ntBASIC3.87□□□□□ -1.79
IFT140Q96RY7 Y_RNA.118-201ENST00000363300 101 ntBASIC3.87□□□□□ -1.79
IFT140Q96RY7 Y_RNA.796-201ENST00000364268 102 ntBASIC3.87□□□□□ -1.79
IFT140Q96RY7 Y_RNA.799-201ENST00000364992 102 ntBASIC3.87□□□□□ -1.79
IFT140Q96RY7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.87□□□□□ -1.79
IFT140Q96RY7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.87□□□□□ -1.79
IFT140Q96RY7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
IFT140Q96RY7 AC119751.1-201ENST00000513357 765 ntBASIC3.87□□□□□ -1.79
IFT140Q96RY7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.87□□□□□ -1.79
IFT140Q96RY7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
IFT140Q96RY7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.87□□□□□ -1.79
IFT140Q96RY7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
IFT140Q96RY7 EXOC5P1-201ENST00000510543 1969 ntBASIC3.87□□□□□ -1.79
IFT140Q96RY7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
IFT140Q96RY7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
IFT140Q96RY7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 RNA5SP213-201ENST00000391031 106 ntBASIC3.86□□□□□ -1.79
IFT140Q96RY7 RNA5SP210-201ENST00000391034 120 ntBASIC3.86□□□□□ -1.79
IFT140Q96RY7 AL158825.1-201ENST00000414735 521 ntBASIC3.86□□□□□ -1.79
IFT140Q96RY7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 MIR4781-201ENST00000585250 76 ntBASIC3.86□□□□□ -1.79
IFT140Q96RY7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 AP002967.1-201ENST00000624203 539 ntBASIC3.86□□□□□ -1.79
IFT140Q96RY7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
IFT140Q96RY7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
IFT140Q96RY7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
IFT140Q96RY7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
IFT140Q96RY7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
IFT140Q96RY7 GABPAP-201ENST00000419271 1356 ntBASIC3.86□□□□□ -1.79
IFT140Q96RY7 SNORA62.2-201ENST00000364672 152 ntBASIC3.86□□□□□ -1.79
IFT140Q96RY7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.86□□□□□ -1.79
IFT140Q96RY7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 MIR219B-201ENST00000637023 88 ntBASIC3.86□□□□□ -1.79
IFT140Q96RY7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
IFT140Q96RY7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
IFT140Q96RY7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
IFT140Q96RY7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
IFT140Q96RY7 MTND5P28-201ENST00000438005 1594 ntBASIC3.85□□□□□ -1.79
IFT140Q96RY7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
IFT140Q96RY7 AL023284.1-201ENST00000403956 276 ntBASIC3.85□□□□□ -1.79
IFT140Q96RY7 AL591416.1-201ENST00000404015 867 ntBASIC3.85□□□□□ -1.79
IFT140Q96RY7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.85□□□□□ -1.79
IFT140Q96RY7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.85□□□□□ -1.79
IFT140Q96RY7 RNA5SP445-201ENST00000515889 115 ntBASIC3.85□□□□□ -1.79
IFT140Q96RY7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.85□□□□□ -1.79
IFT140Q96RY7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.85□□□□□ -1.79
IFT140Q96RY7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
IFT140Q96RY7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
IFT140Q96RY7 AL359893.1-201ENST00000447628 1580 ntBASIC3.84□□□□□ -1.79
IFT140Q96RY7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
IFT140Q96RY7 AL162578.1-201ENST00000406202 378 ntBASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms