Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC016877.3-201ENST00000606778 504 ntBASIC1.95□□□□□ -2.1
GAFA1Q96PS6 AL627309.6-201ENST00000606857 840 ntBASIC1.95□□□□□ -2.1
GAFA1Q96PS6 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
GAFA1Q96PS6 MAPK10-266ENST00000641066 6555 ntBASIC1.95□□□□□ -2.1
GAFA1Q96PS6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
GAFA1Q96PS6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 MIR449A-201ENST00000362113 91 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AL354719.1-201ENST00000406535 843 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 RNA5SP181-201ENST00000410246 98 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 RNA5SP80-201ENST00000410475 111 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 MTATP6P11-201ENST00000428071 670 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 RPS15AP28-201ENST00000435088 386 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 SETP8-201ENST00000435341 628 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 SNORA59A-201ENST00000459326 152 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC006483.1-201ENST00000487308 313 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 HAUS1P1-201ENST00000505275 832 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 TMEM248P1-201ENST00000510579 951 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 ACTR6P1-201ENST00000514311 1104 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AP004242.1-201ENST00000533701 349 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AL157394.1-201ENST00000562983 1224 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC105137.2-201ENST00000569073 466 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC010653.1-201ENST00000571108 881 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AL133393.1-201ENST00000603277 287 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 SNORA35B-201ENST00000607417 129 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC009159.1-201ENST00000618386 642 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC092184.1-201ENST00000625042 715 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 IGHVIII-44-202ENST00000636235 289 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 AC046144.1-201ENST00000478559 1853 ntBASIC1.94□□□□□ -2.1
GAFA1Q96PS6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
GAFA1Q96PS6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 XGY1-201ENST00000381172 446 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 Y_RNA.500-201ENST00000384466 111 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 XKRYP4-201ENST00000414395 483 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 HIGD1AP11-201ENST00000438361 280 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 VN1R48P-201ENST00000448149 1036 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 XKRYP5-201ENST00000449659 483 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 RPS15AP1-201ENST00000457423 391 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 KC877373.1-201ENST00000479066 408 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 HSPE1P6-201ENST00000479457 291 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AC012181.1-201ENST00000479895 423 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AL024509.2-201ENST00000493462 493 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AP002812.4-201ENST00000532139 286 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 SETP2-201ENST00000553886 926 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AC106734.1-201ENST00000568646 663 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 MIR5007-201ENST00000583098 95 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AC079089.3-201ENST00000603094 673 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AC007938.3-201ENST00000604965 623 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AC010297.1-201ENST00000623948 149 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 AL359693.1-201ENST00000614959 2407 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 NR1H5P-201ENST00000452683 1377 ntBASIC1.93□□□□□ -2.1
GAFA1Q96PS6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
GAFA1Q96PS6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 SSXP9-201ENST00000417503 292 ntBASIC1.92□□□□□ -2.1
GAFA1Q96PS6 AC022022.1-201ENST00000430304 178 ntBASIC1.92□□□□□ -2.1
GAFA1Q96PS6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 RSL24D1P2-201ENST00000445584 366 ntBASIC1.92□□□□□ -2.1
GAFA1Q96PS6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 AC108471.1-201ENST00000513977 287 ntBASIC1.92□□□□□ -2.1
GAFA1Q96PS6 RNA5SP281-201ENST00000516504 135 ntBASIC1.92□□□□□ -2.1
GAFA1Q96PS6 OR4R2P-201ENST00000530815 597 ntBASIC1.92□□□□□ -2.1
GAFA1Q96PS6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 AL163153.1-201ENST00000554223 283 ntBASIC1.92□□□□□ -2.1
GAFA1Q96PS6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 AP000787.2-201ENST00000604432 568 ntBASIC1.92□□□□□ -2.1
GAFA1Q96PS6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.92□□□□□ -2.1
GAFA1Q96PS6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms