Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
USP47Q96K76 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
USP47Q96K76 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.72□□□□□ -1.81
USP47Q96K76 MIR142-201ENST00000384835 87 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 MTCO3P31-201ENST00000405526 789 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 AC004022.2-201ENST00000413824 193 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP47Q96K76 AL513328.1-201ENST00000446460 224 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 RPS3P1-201ENST00000456781 192 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 AP000926.1-201ENST00000479573 241 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 SRIP1-201ENST00000489235 288 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.72□□□□□ -1.81
USP47Q96K76 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
USP47Q96K76 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.72□□□□□ -1.81
USP47Q96K76 AL512310.1-201ENST00000548639 172 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 CBX3P5-201ENST00000552017 521 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.72□□□□□ -1.81
USP47Q96K76 AL845331.3-202ENST00000562856 261 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 AC234778.2-201ENST00000566241 354 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 ATP5F1P7-201ENST00000567330 760 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 MTATP6P25-201ENST00000574491 261 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 AC010680.4-201ENST00000605334 543 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
USP47Q96K76 AL139811.1-201ENST00000424779 2299 ntBASIC3.72□□□□□ -1.81
USP47Q96K76 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
USP47Q96K76 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
USP47Q96K76 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP47Q96K76 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.71□□□□□ -1.82
USP47Q96K76 AL356057.1-202ENST00000402263 756 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 SDCBPP3-201ENST00000419629 891 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 AC114878.1-201ENST00000441166 358 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.71□□□□□ -1.82
USP47Q96K76 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.71□□□□□ -1.82
USP47Q96K76 AC128713.1-201ENST00000471495 306 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 OR9N1P-202ENST00000494289 481 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 RNU1-41P-201ENST00000516161 162 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 RNU1-48P-201ENST00000516400 162 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.71□□□□□ -1.82
USP47Q96K76 OR8L1P-201ENST00000534005 955 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 AC243972.3-201ENST00000539655 198 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 AC025260.1-201ENST00000548858 430 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.71□□□□□ -1.82
USP47Q96K76 AC006116.7-201ENST00000590141 756 ntBASIC3.71□□□□□ -1.82
USP47Q96K76 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.71□□□□□ -1.82
USP47Q96K76 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.71□□□□□ -1.82
USP47Q96K76 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.71□□□□□ -1.82
USP47Q96K76 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.71□□□□□ -1.82
USP47Q96K76 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
USP47Q96K76 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
USP47Q96K76 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP47Q96K76 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.7□□□□□ -1.82
USP47Q96K76 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP47Q96K76 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.7□□□□□ -1.82
USP47Q96K76 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP47Q96K76 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP47Q96K76 RNA5SP239-201ENST00000410218 129 ntBASIC3.7□□□□□ -1.82
USP47Q96K76 NPM1P11-201ENST00000417106 855 ntBASIC3.7□□□□□ -1.82
USP47Q96K76 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.7□□□□□ -1.82
USP47Q96K76 FTH1P6-201ENST00000430768 320 ntBASIC3.7□□□□□ -1.82
USP47Q96K76 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.7□□□□□ -1.82
USP47Q96K76 AL645939.1-201ENST00000453429 797 ntBASIC3.7□□□□□ -1.82
USP47Q96K76 RPL21P71-201ENST00000465598 459 ntBASIC3.7□□□□□ -1.82
USP47Q96K76 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.7□□□□□ -1.82
USP47Q96K76 AC104687.1-201ENST00000485829 412 ntBASIC3.7□□□□□ -1.82
USP47Q96K76 POU5F1P7-201ENST00000508759 541 ntBASIC3.7□□□□□ -1.82
USP47Q96K76 VN1R79P-201ENST00000593540 513 ntBASIC3.7□□□□□ -1.82
USP47Q96K76 AL590808.1-201ENST00000618696 141 ntBASIC3.7□□□□□ -1.82
USP47Q96K76 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.7□□□□□ -1.82
USP47Q96K76 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP47Q96K76 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.7□□□□□ -1.82
USP47Q96K76 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP47Q96K76 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP47Q96K76 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP47Q96K76 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP47Q96K76 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP47Q96K76 SNORA70B-201ENST00000384210 135 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 RNU2-6P-201ENST00000411404 190 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 OR2B8P-201ENST00000432841 938 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 AL353093.1-201ENST00000441292 436 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 XKRY2-201ENST00000442362 1093 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.69□□□□□ -1.82
USP47Q96K76 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.69□□□□□ -1.82
USP47Q96K76 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
USP47Q96K76 MTND3P4-201ENST00000453537 303 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 AC092185.1-201ENST00000491371 97 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.69□□□□□ -1.82
USP47Q96K76 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.69□□□□□ -1.82
USP47Q96K76 SNORA48.9-201ENST00000516419 162 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 OR4A45P-201ENST00000529954 901 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 TRAV37-201ENST00000553906 342 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.69□□□□□ -1.82
USP47Q96K76 AC069234.5-201ENST00000611056 416 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.69□□□□□ -1.82
USP47Q96K76 ELF2P3-201ENST00000445099 1506 ntBASIC3.69□□□□□ -1.82
USP47Q96K76 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.69□□□□□ -1.82
USP47Q96K76 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP47Q96K76 U3.15-201ENST00000365398 212 ntBASIC3.68□□□□□ -1.82
USP47Q96K76 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms