Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 ATP5F1P4-201ENST00000397288 746 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AL138878.1-201ENST00000405131 347 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC068533.1-201ENST00000418542 415 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 MTND4LP10-201ENST00000435146 291 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 RPL18AP17-201ENST00000455326 198 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC005410.1-202ENST00000460347 485 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC106707.2-201ENST00000484182 374 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC090453.1-201ENST00000495560 436 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC114981.1-201ENST00000503897 678 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 OR5M7P-201ENST00000526140 972 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 MTND1P8-201ENST00000571424 950 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AP001269.3-201ENST00000588718 329 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC244505.7-201ENST00000599675 272 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC243773.3-201ENST00000613270 256 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC015967.1-201ENST00000619893 476 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC004009.2-201ENST00000623016 728 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.81□□□□□ -1.8
SIPA1Q96FS4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIPA1Q96FS4 AP002907.1-201ENST00000606361 1430 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 MAPK10-372ENST00000641954 3413 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 RNU6-1122P-201ENST00000384449 107 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 RNA5SP306-201ENST00000411087 107 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC127526.1-201ENST00000417526 366 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 MTND2P5-201ENST00000432656 1006 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 ELOCP8-201ENST00000439309 332 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 ELOCP15-201ENST00000442090 332 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 RPL7P52-201ENST00000449200 742 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 HMGB1P15-201ENST00000453854 435 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 DUXAP8-207ENST00000456786 622 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 UBDP1-202ENST00000457888 382 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 snoU13.4-201ENST00000458916 104 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC087312.1-201ENST00000471411 480 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 RPL7P38-201ENST00000488396 739 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC096751.1-202ENST00000502691 1067 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 TRAV31-201ENST00000502780 342 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC025554.1-201ENST00000505641 188 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 HMGB3P15-201ENST00000507326 574 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC110768.1-201ENST00000509222 400 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 RNU6-583P-201ENST00000516012 92 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC023813.2-201ENST00000564321 469 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC092354.2-201ENST00000607786 514 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC106052.1-201ENST00000608029 497 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 DUXAP10-204ENST00000612052 616 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC025588.4-201ENST00000615802 908 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC109809.1-201ENST00000619665 545 ntBASIC3.8□□□□□ -1.8
SIPA1Q96FS4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SIPA1Q96FS4 AC066616.2-201ENST00000559334 1481 ntBASIC3.79□□□□□ -1.8
SIPA1Q96FS4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIPA1Q96FS4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIPA1Q96FS4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIPA1Q96FS4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms