Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.39□□□□□ -2.03
TTC28Q96AY4 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TTC28Q96AY4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.39□□□□□ -2.03
TTC28Q96AY4 AL355493.4-201ENST00000618530 292 ntBASIC2.39□□□□□ -2.03
TTC28Q96AY4 AC069528.2-201ENST00000624849 1991 ntBASIC2.38□□□□□ -2.03
TTC28Q96AY4 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.38□□□□□ -2.03
TTC28Q96AY4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.38□□□□□ -2.03
TTC28Q96AY4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TTC28Q96AY4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.38□□□□□ -2.03
TTC28Q96AY4 U3.11-201ENST00000364476 212 ntBASIC2.38□□□□□ -2.03
TTC28Q96AY4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TTC28Q96AY4 RNU2-68P-201ENST00000410878 191 ntBASIC2.38□□□□□ -2.03
TTC28Q96AY4 AC080125.1-201ENST00000414888 684 ntBASIC2.38□□□□□ -2.03
TTC28Q96AY4 BX679664.1-201ENST00000434429 253 ntBASIC2.38□□□□□ -2.03
TTC28Q96AY4 AC013410.1-201ENST00000436223 1232 ntBASIC2.38□□□□□ -2.03
TTC28Q96AY4 AC105137.2-201ENST00000569073 466 ntBASIC2.38□□□□□ -2.03
TTC28Q96AY4 MIR4452-201ENST00000583004 71 ntBASIC2.38□□□□□ -2.03
TTC28Q96AY4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TTC28Q96AY4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TTC28Q96AY4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
TTC28Q96AY4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
TTC28Q96AY4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TTC28Q96AY4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
TTC28Q96AY4 MIR448-201ENST00000362131 111 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
TTC28Q96AY4 SNORA67.3-201ENST00000384366 140 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 AL591416.1-201ENST00000404015 867 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 RNA5SP61-201ENST00000516453 100 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 AL731537.2-201ENST00000561565 951 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 AP001542.2-201ENST00000593141 364 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 AL596275.2-204ENST00000641628 552 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 AL596275.2-206ENST00000641957 626 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TTC28Q96AY4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TTC28Q96AY4 AL353746.1-201ENST00000566293 6881 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 RNU2-17P-201ENST00000410290 190 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 RNA5SP104-201ENST00000410989 118 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.37□□□□□ -2.03
TTC28Q96AY4 UBE2V1P5-201ENST00000440070 405 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC2.37□□□□□ -2.03
TTC28Q96AY4 AC140059.1-201ENST00000489238 361 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.37□□□□□ -2.03
TTC28Q96AY4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.37□□□□□ -2.03
TTC28Q96AY4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.37□□□□□ -2.03
TTC28Q96AY4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.37□□□□□ -2.03
TTC28Q96AY4 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 AC107081.3-201ENST00000612715 2034 ntBASIC2.37□□□□□ -2.03
TTC28Q96AY4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
TTC28Q96AY4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.37□□□□□ -2.03
TTC28Q96AY4 MIR30E-201ENST00000362104 92 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TTC28Q96AY4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TTC28Q96AY4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.36□□□□□ -2.03
TTC28Q96AY4 AC009238.1-201ENST00000442165 424 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 AC009237.6-201ENST00000446969 424 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.36□□□□□ -2.03
TTC28Q96AY4 LTV1P1-201ENST00000510683 1237 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TTC28Q96AY4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TTC28Q96AY4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC2.36□□□□□ -2.03
TTC28Q96AY4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU6-1-201ENST00000383898 107 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU6-42P-201ENST00000384165 107 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU6-36P-201ENST00000384172 107 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU6-4P-201ENST00000384205 107 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU6-5P-201ENST00000384238 107 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 U8.10-201ENST00000384260 133 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU6-3P-201ENST00000384314 107 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU1-89P-201ENST00000384592 164 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU6-2-201ENST00000384627 107 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU6-9-201ENST00000384776 107 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU6-33P-201ENST00000384793 107 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 SNORA11.4-201ENST00000408823 129 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 HMGB1P25-201ENST00000468402 607 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.36□□□□□ -2.03
TTC28Q96AY4 AC021733.2-201ENST00000518830 497 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 AC068339.2-201ENST00000534395 618 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 AP005262.1-201ENST00000582646 997 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 RNU6-6P-201ENST00000606623 107 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 CRYM-AS1-204ENST00000637983 556 ntBASIC2.36□□□□□ -2.03
TTC28Q96AY4 Y_RNA.205-201ENST00000364128 113 ntBASIC2.35□□□□□ -2.03
TTC28Q96AY4 SNORA41-201ENST00000384675 132 ntBASIC2.35□□□□□ -2.03
TTC28Q96AY4 RN7SKP140-201ENST00000411196 284 ntBASIC2.35□□□□□ -2.03
TTC28Q96AY4 RNA5SP107-201ENST00000411358 122 ntBASIC2.35□□□□□ -2.03
TTC28Q96AY4 RPS7P9-201ENST00000414704 586 ntBASIC2.35□□□□□ -2.03
TTC28Q96AY4 AC092798.1-201ENST00000458542 409 ntBASIC2.35□□□□□ -2.03
TTC28Q96AY4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.35□□□□□ -2.03
TTC28Q96AY4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.35□□□□□ -2.03
TTC28Q96AY4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.35□□□□□ -2.03
TTC28Q96AY4 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.35□□□□□ -2.03
TTC28Q96AY4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TTC28Q96AY4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
TTC28Q96AY4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TTC28Q96AY4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.35□□□□□ -2.03
TTC28Q96AY4 RPL23AP22-201ENST00000437556 453 ntBASIC2.35□□□□□ -2.03
TTC28Q96AY4 AC092473.1-201ENST00000441098 221 ntBASIC2.35□□□□□ -2.03
TTC28Q96AY4 RNA5SP220-201ENST00000516298 104 ntBASIC2.35□□□□□ -2.03
TTC28Q96AY4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.35□□□□□ -2.03
TTC28Q96AY4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TTC28Q96AY4 ELL2P4-201ENST00000446870 1376 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms