Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.84□□□□□ -1.8
TOPBP1Q92547 MTND5P29-201ENST00000458676 1807 ntBASIC3.84□□□□□ -1.8
TOPBP1Q92547 RPL23AP70-201ENST00000483361 460 ntBASIC3.84□□□□□ -1.8
TOPBP1Q92547 AP000926.3-201ENST00000497201 299 ntBASIC3.84□□□□□ -1.8
TOPBP1Q92547 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.84□□□□□ -1.8
TOPBP1Q92547 AC117522.2-201ENST00000510049 657 ntBASIC3.84□□□□□ -1.8
TOPBP1Q92547 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.84□□□□□ -1.8
TOPBP1Q92547 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.84□□□□□ -1.8
TOPBP1Q92547 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.84□□□□□ -1.8
TOPBP1Q92547 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.84□□□□□ -1.8
TOPBP1Q92547 CR589904.2-201ENST00000612533 440 ntBASIC3.84□□□□□ -1.8
TOPBP1Q92547 MIR6766-201ENST00000622641 72 ntBASIC3.84□□□□□ -1.8
TOPBP1Q92547 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOPBP1Q92547 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.83□□□□□ -1.8
TOPBP1Q92547 Y_RNA.140-201ENST00000363474 103 ntBASIC3.83□□□□□ -1.8
TOPBP1Q92547 RNA5SP213-201ENST00000391031 106 ntBASIC3.83□□□□□ -1.8
TOPBP1Q92547 FAT1P1-201ENST00000406588 507 ntBASIC3.83□□□□□ -1.8
TOPBP1Q92547 MIR1183-201ENST00000408856 89 ntBASIC3.83□□□□□ -1.8
TOPBP1Q92547 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.83□□□□□ -1.8
TOPBP1Q92547 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.83□□□□□ -1.8
TOPBP1Q92547 SCARNA17.1-201ENST00000516211 143 ntBASIC3.83□□□□□ -1.8
TOPBP1Q92547 SCARNA17.2-201ENST00000516334 143 ntBASIC3.83□□□□□ -1.8
TOPBP1Q92547 AF186190.1-201ENST00000517470 480 ntBASIC3.83□□□□□ -1.8
TOPBP1Q92547 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.83□□□□□ -1.8
TOPBP1Q92547 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.83□□□□□ -1.8
TOPBP1Q92547 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.83□□□□□ -1.8
TOPBP1Q92547 AL022099.1-201ENST00000604551 712 ntBASIC3.83□□□□□ -1.8
TOPBP1Q92547 SCARNA17.4-201ENST00000614296 143 ntBASIC3.83□□□□□ -1.8
TOPBP1Q92547 MAPK10-322ENST00000641485 4530 ntBASIC3.83□□□□□ -1.8
TOPBP1Q92547 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOPBP1Q92547 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.82□□□□□ -1.8
TOPBP1Q92547 DCAF13P3-201ENST00000561147 1334 ntBASIC3.82□□□□□ -1.8
TOPBP1Q92547 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOPBP1Q92547 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOPBP1Q92547 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.82□□□□□ -1.8
TOPBP1Q92547 UBE2V2P4-201ENST00000447495 259 ntBASIC3.82□□□□□ -1.8
TOPBP1Q92547 HMGB3P8-201ENST00000449709 577 ntBASIC3.82□□□□□ -1.8
TOPBP1Q92547 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.82□□□□□ -1.8
TOPBP1Q92547 FAM92A1P2-202ENST00000504766 877 ntBASIC3.82□□□□□ -1.8
TOPBP1Q92547 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.82□□□□□ -1.8
TOPBP1Q92547 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.82□□□□□ -1.8
TOPBP1Q92547 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.82□□□□□ -1.8
TOPBP1Q92547 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.82□□□□□ -1.8
TOPBP1Q92547 AC008126.1-201ENST00000549019 480 ntBASIC3.82□□□□□ -1.8
TOPBP1Q92547 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.82□□□□□ -1.8
TOPBP1Q92547 AP001521.1-201ENST00000609150 300 ntBASIC3.82□□□□□ -1.8
TOPBP1Q92547 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TOPBP1Q92547 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.82□□□□□ -1.8
TOPBP1Q92547 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TOPBP1Q92547 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 SNORA26.9-201ENST00000391322 122 ntBASIC3.81□□□□□ -1.8
TOPBP1Q92547 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 RNU7-157P-201ENST00000459600 66 ntBASIC3.81□□□□□ -1.8
TOPBP1Q92547 OR9N1P-201ENST00000491296 333 ntBASIC3.81□□□□□ -1.8
TOPBP1Q92547 AC021146.5-201ENST00000503544 545 ntBASIC3.81□□□□□ -1.8
TOPBP1Q92547 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 RNA5SP445-201ENST00000515889 115 ntBASIC3.81□□□□□ -1.8
TOPBP1Q92547 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 AC103710.1-201ENST00000610003 901 ntBASIC3.81□□□□□ -1.8
TOPBP1Q92547 MIR219B-201ENST00000637023 88 ntBASIC3.81□□□□□ -1.8
TOPBP1Q92547 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TOPBP1Q92547 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.81□□□□□ -1.8
TOPBP1Q92547 NSRP1P1-201ENST00000444067 1693 ntBASIC3.81□□□□□ -1.8
TOPBP1Q92547 RNU1-17P-201ENST00000363022 152 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 MIR221-201ENST00000385135 110 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TOPBP1Q92547 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.8□□□□□ -1.8
TOPBP1Q92547 CACYBPP1-201ENST00000438592 684 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 RPL21P71-201ENST00000465598 459 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 AK6P1-201ENST00000540219 478 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 AC107871.2-201ENST00000612894 502 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TOPBP1Q92547 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.8□□□□□ -1.8
TOPBP1Q92547 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TOPBP1Q92547 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TOPBP1Q92547 Y_RNA.466-201ENST00000384294 113 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 SNORA67.3-201ENST00000384366 140 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 AC234781.4-201ENST00000419384 244 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 CYCSP49-201ENST00000420810 319 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 RPS15AP28-201ENST00000435088 386 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.8□□□□□ -1.8
TOPBP1Q92547 AC068339.2-201ENST00000534395 618 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 MIR4644-201ENST00000579929 84 ntBASIC3.8□□□□□ -1.8
TOPBP1Q92547 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.8□□□□□ -1.8
TOPBP1Q92547 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.79□□□□□ -1.8
TOPBP1Q92547 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TOPBP1Q92547 AL359893.1-201ENST00000447628 1580 ntBASIC3.79□□□□□ -1.8
TOPBP1Q92547 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TOPBP1Q92547 COX6CP2-201ENST00000444980 225 ntBASIC3.79□□□□□ -1.8
TOPBP1Q92547 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.79□□□□□ -1.8
TOPBP1Q92547 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.79□□□□□ -1.8
TOPBP1Q92547 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.79□□□□□ -1.8
TOPBP1Q92547 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms