Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 MIR26A1-201ENST00000362205 77 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AL354719.1-201ENST00000406535 843 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 DUTP6-201ENST00000425573 462 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 RPL21P40-201ENST00000428586 483 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AL513043.1-201ENST00000439124 535 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AC107083.1-201ENST00000439643 279 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 RPL17P49-201ENST00000443728 411 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AC006111.3-201ENST00000622137 383 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AC073348.1-201ENST00000623002 331 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 AL161431.1-201ENST00000618966 4205 ntBASIC3.25□□□□□ -1.89
CCDC12Q8WUD4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 SAR1AP2-201ENST00000392696 594 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AL121972.1-201ENST00000402023 252 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 SNORD88.1-201ENST00000408684 91 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 RPS7P2-201ENST00000435134 607 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC093156.1-201ENST00000440382 670 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC112653.1-201ENST00000443851 386 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AP002345.1-201ENST00000456493 928 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC091179.1-201ENST00000461606 579 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC006483.1-201ENST00000487308 313 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 HIGD1AP13-201ENST00000509878 289 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 HMGB1P47-201ENST00000511281 589 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 RPL7L1P13-201ENST00000511702 739 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 RNA5SP468-201ENST00000516782 93 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC107871.2-201ENST00000612894 502 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AC107905.1-201ENST00000616204 426 ntBASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC12Q8WUD4 AL645568.2-201ENST00000432815 1337 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 ASNSP3-201ENST00000451989 1306 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 RPL9P7-201ENST00000330965 580 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 RNU6-819P-201ENST00000364116 107 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 RPL5P18-201ENST00000406671 891 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 HSPE1P1-201ENST00000421494 318 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 RPS29P6-201ENST00000438196 145 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 RPS24P13-201ENST00000442520 397 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AL135938.1-201ENST00000443141 297 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 RPL7P5-201ENST00000471472 736 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AC097462.2-201ENST00000504623 481 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 SNORA9.3-201ENST00000516383 129 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 MIR3605-201ENST00000583214 100 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AL160281.1-201ENST00000605307 311 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AL513477.2-201ENST00000607858 568 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AC006963.1-201ENST00000624003 1052 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AL137790.1-201ENST00000634283 177 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 AC092593.1-201ENST00000515413 1815 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.23□□□□□ -1.89
CCDC12Q8WUD4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CCDC12Q8WUD4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC12Q8WUD4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms