Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC004908.2-201ENST00000609090 574 ntBASIC4.91□□□□□ -1.62
NUP43Q8NFH3 AC019193.3-201ENST00000609144 554 ntBASIC4.91□□□□□ -1.62
NUP43Q8NFH3 7SK.10-201ENST00000621414 298 ntBASIC4.91□□□□□ -1.62
NUP43Q8NFH3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP43Q8NFH3 AC135068.12-201ENST00000637370 931 ntBASIC4.91□□□□□ -1.62
NUP43Q8NFH3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP43Q8NFH3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP43Q8NFH3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
NUP43Q8NFH3 PANDAR-201ENST00000629595 1506 ntBASIC4.91□□□□□ -1.62
NUP43Q8NFH3 Z95331.1-201ENST00000623075 23112 ntBASIC4.91□□□□□ -1.62
NUP43Q8NFH3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP43Q8NFH3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP43Q8NFH3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP43Q8NFH3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
NUP43Q8NFH3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP43Q8NFH3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.9□□□□□ -1.62
NUP43Q8NFH3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.9□□□□□ -1.62
NUP43Q8NFH3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
NUP43Q8NFH3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NUP43Q8NFH3 AC092747.4-201ENST00000620519 1861 ntBASIC4.9□□□□□ -1.62
NUP43Q8NFH3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NUP43Q8NFH3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.9□□□□□ -1.62
NUP43Q8NFH3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUP43Q8NFH3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
NUP43Q8NFH3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.9□□□□□ -1.62
NUP43Q8NFH3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
NUP43Q8NFH3 Y_RNA.31-201ENST00000362574 102 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 SNORA62.1-201ENST00000364287 154 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 U3.11-201ENST00000364476 212 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 RNA5SP132-201ENST00000364725 118 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 RNU6-639P-201ENST00000384074 107 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AL592114.1-201ENST00000403842 483 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AL606923.1-201ENST00000406616 190 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 MIR1178-201ENST00000408396 91 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AC069218.2-201ENST00000411665 344 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 BX323014.1-201ENST00000412876 237 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 COX5BP7-201ENST00000414780 274 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AC005517.2-201ENST00000424673 553 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AL031736.2-201ENST00000426573 787 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 UBE2V1P13-201ENST00000436983 439 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 PRPF38AP2-201ENST00000438179 851 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 HMGB3P11-201ENST00000440127 604 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 FHP1-201ENST00000442741 703 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 PRPS1P1-201ENST00000445305 876 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 RNU7-182P-201ENST00000459009 62 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 RNU7-180P-201ENST00000459240 63 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AC090602.1-201ENST00000469695 252 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AC126389.1-201ENST00000477436 290 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 RNA5SP362-201ENST00000516048 118 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AC100784.1-201ENST00000522790 310 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 COPS8P3-201ENST00000526024 482 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AC022884.2-201ENST00000578535 580 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 MIR4489-201ENST00000578869 62 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AC005191.1-201ENST00000603950 358 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 AL078596.1-201ENST00000624856 447 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 CYP4F35P-202ENST00000636121 390 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 MTND5P28-201ENST00000438005 1594 ntBASIC4.9□□□□□ -1.63
NUP43Q8NFH3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.9□□□□□ -1.63
NUP43Q8NFH3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NUP43Q8NFH3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NUP43Q8NFH3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP43Q8NFH3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUP43Q8NFH3 AC093671.1-201ENST00000624981 2929 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 U3.7-201ENST00000363668 216 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 Y_RNA.167-201ENST00000363735 109 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 RNU6-1105P-201ENST00000384774 107 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 RPL21P67-201ENST00000402896 478 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 AL391361.1-201ENST00000405580 489 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 MIR548K-201ENST00000408406 116 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 RN7SKP247-201ENST00000411094 308 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 AC113618.1-201ENST00000416747 285 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.89□□□□□ -1.63
NUP43Q8NFH3 PMCHL1-202ENST00000423102 261 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 AL358176.2-201ENST00000425769 204 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.89□□□□□ -1.63
NUP43Q8NFH3 AL118520.1-201ENST00000450770 291 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 AL354710.1-201ENST00000453641 246 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.89□□□□□ -1.63
NUP43Q8NFH3 RN7SL610P-201ENST00000463845 291 ntBASIC4.89□□□□□ -1.63
NUP43Q8NFH3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms