Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC096996.1-201ENST00000563813 325 ntBASIC5.98□□□□□ -1.45
SIX5Q8N196 AC010653.1-201ENST00000571108 881 ntBASIC5.98□□□□□ -1.45
SIX5Q8N196 MIR3189-201ENST00000578735 73 ntBASIC5.98□□□□□ -1.45
SIX5Q8N196 RN7SL708P-201ENST00000580952 299 ntBASIC5.98□□□□□ -1.45
SIX5Q8N196 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.98□□□□□ -1.45
SIX5Q8N196 AL138889.2-201ENST00000603883 242 ntBASIC5.98□□□□□ -1.45
SIX5Q8N196 AC104687.2-201ENST00000604442 342 ntBASIC5.98□□□□□ -1.45
SIX5Q8N196 AL670379.4-201ENST00000605279 254 ntBASIC5.98□□□□□ -1.45
SIX5Q8N196 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.98□□□□□ -1.45
SIX5Q8N196 ATP5A1P2-202ENST00000616464 443 ntBASIC5.98□□□□□ -1.45
SIX5Q8N196 AL713922.2-201ENST00000619384 716 ntBASIC5.98□□□□□ -1.45
SIX5Q8N196 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SIX5Q8N196 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SIX5Q8N196 ZNF519P1-201ENST00000449011 1626 ntBASIC5.98□□□□□ -1.45
SIX5Q8N196 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SIX5Q8N196 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SIX5Q8N196 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.98□□□□□ -1.45
SIX5Q8N196 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.98□□□□□ -1.45
SIX5Q8N196 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.98□□□□□ -1.45
SIX5Q8N196 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.98□□□□□ -1.45
SIX5Q8N196 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 AC027228.2-201ENST00000567141 2154 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
SIX5Q8N196 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.97□□□□□ -1.45
SIX5Q8N196 AP002370.1-201ENST00000528055 1602 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 AC006484.1-201ENST00000435086 1884 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 Y_RNA.149-201ENST00000363558 117 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 RNU6-339P-201ENST00000384310 107 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 RNU6-985P-201ENST00000410182 104 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 RNU4-65P-201ENST00000410473 140 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX5Q8N196 AC099677.3-201ENST00000427081 395 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.97□□□□□ -1.45
SIX5Q8N196 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.97□□□□□ -1.45
SIX5Q8N196 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX5Q8N196 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.97□□□□□ -1.45
SIX5Q8N196 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX5Q8N196 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX5Q8N196 RPL7AP6-201ENST00000477943 801 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 AC072052.1-201ENST00000496556 306 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.97□□□□□ -1.45
SIX5Q8N196 MTCO2P24-201ENST00000515611 426 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 RNA5SP228-201ENST00000516232 133 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 RNU6-1016P-201ENST00000516689 94 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 RNU6-1213P-201ENST00000517075 94 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 NRBF2P4-201ENST00000520874 850 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 AC100870.1-201ENST00000522035 505 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 IGHV1-14-201ENST00000523391 241 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX5Q8N196 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX5Q8N196 TXNP4-201ENST00000575018 310 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SIX5Q8N196 MIR3941-201ENST00000582572 103 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 VN1R107P-201ENST00000601784 209 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 ATP1B3P1-201ENST00000605365 821 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 AC145423.1-201ENST00000605712 336 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 MIR6820-201ENST00000611508 62 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 SNHG22-203ENST00000617833 660 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
SIX5Q8N196 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.97□□□□□ -1.45
SIX5Q8N196 OR9K1P-202ENST00000641111 3217 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.97□□□□□ -1.45
SIX5Q8N196 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX5Q8N196 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SIX5Q8N196 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SIX5Q8N196 KPNA2P1-201ENST00000458289 1591 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.97□□□□□ -1.45
SIX5Q8N196 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SIX5Q8N196 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
SIX5Q8N196 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.96□□□□□ -1.45
SIX5Q8N196 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SIX5Q8N196 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
SIX5Q8N196 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SIX5Q8N196 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SIX5Q8N196 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SIX5Q8N196 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SIX5Q8N196 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SIX5Q8N196 RNU6-562P-201ENST00000362731 107 ntBASIC5.96□□□□□ -1.46
SIX5Q8N196 SNORA75B-201ENST00000384053 137 ntBASIC5.96□□□□□ -1.46
SIX5Q8N196 RNU6-1127P-201ENST00000384580 107 ntBASIC5.96□□□□□ -1.46
SIX5Q8N196 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SIX5Q8N196 MRPL42P3-201ENST00000401492 326 ntBASIC5.96□□□□□ -1.46
SIX5Q8N196 AL645733.1-201ENST00000402250 217 ntBASIC5.96□□□□□ -1.46
SIX5Q8N196 RNU4-25P-201ENST00000410569 230 ntBASIC5.96□□□□□ -1.46
SIX5Q8N196 Y_RNA.646-201ENST00000410980 101 ntBASIC5.96□□□□□ -1.46
SIX5Q8N196 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.96□□□□□ -1.46
SIX5Q8N196 AC092017.2-201ENST00000427600 362 ntBASIC5.96□□□□□ -1.46
SIX5Q8N196 AL160004.2-201ENST00000432935 350 ntBASIC5.96□□□□□ -1.46
SIX5Q8N196 RPL21P112-201ENST00000434403 463 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms