Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 Y_RNA.595-201ENST00000410403 105 ntBASIC3.27□□□□□ -1.89
UBR1Q8IWV7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 MIR7111-201ENST00000619751 72 ntBASIC3.27□□□□□ -1.89
UBR1Q8IWV7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.27□□□□□ -1.89
UBR1Q8IWV7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 AL606490.7-201ENST00000433136 191 ntBASIC3.27□□□□□ -1.89
UBR1Q8IWV7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 MTCYBP19-201ENST00000517463 1124 ntBASIC3.27□□□□□ -1.89
UBR1Q8IWV7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.27□□□□□ -1.89
UBR1Q8IWV7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 Y_RNA.140-201ENST00000363474 103 ntBASIC3.26□□□□□ -1.89
UBR1Q8IWV7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 AC234781.4-201ENST00000419384 244 ntBASIC3.26□□□□□ -1.89
UBR1Q8IWV7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 RPL23AP42-201ENST00000471152 471 ntBASIC3.26□□□□□ -1.89
UBR1Q8IWV7 AP001207.1-201ENST00000524051 481 ntBASIC3.26□□□□□ -1.89
UBR1Q8IWV7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 AC025281.1-201ENST00000567026 265 ntBASIC3.26□□□□□ -1.89
UBR1Q8IWV7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 AC103710.3-201ENST00000608157 948 ntBASIC3.26□□□□□ -1.89
UBR1Q8IWV7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.26□□□□□ -1.89
UBR1Q8IWV7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.25□□□□□ -1.89
UBR1Q8IWV7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.25□□□□□ -1.89
UBR1Q8IWV7 AL356292.1-201ENST00000283110 373 ntBASIC3.25□□□□□ -1.89
UBR1Q8IWV7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
UBR1Q8IWV7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.25□□□□□ -1.89
UBR1Q8IWV7 NPM1P49-201ENST00000448027 714 ntBASIC3.25□□□□□ -1.89
UBR1Q8IWV7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.25□□□□□ -1.89
UBR1Q8IWV7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.25□□□□□ -1.89
UBR1Q8IWV7 AP000926.3-201ENST00000497201 299 ntBASIC3.25□□□□□ -1.89
UBR1Q8IWV7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.25□□□□□ -1.89
UBR1Q8IWV7 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.25□□□□□ -1.89
UBR1Q8IWV7 AK6P1-201ENST00000540219 478 ntBASIC3.25□□□□□ -1.89
UBR1Q8IWV7 AC012119.1-201ENST00000603184 222 ntBASIC3.25□□□□□ -1.89
UBR1Q8IWV7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.25□□□□□ -1.89
UBR1Q8IWV7 AP003499.2-201ENST00000624100 483 ntBASIC3.25□□□□□ -1.89
UBR1Q8IWV7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
UBR1Q8IWV7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
UBR1Q8IWV7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 RNU2-2P-201ENST00000410396 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.15-201ENST00000611544 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.16-201ENST00000613119 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.12-201ENST00000613778 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.20-201ENST00000613956 192 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.9-201ENST00000615427 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.11-201ENST00000616345 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.2-201ENST00000616535 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.3-201ENST00000617785 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.19-201ENST00000618602 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 RNU2-1-201ENST00000618664 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.6-201ENST00000619225 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.5-201ENST00000619465 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 U2.10-201ENST00000620268 191 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 AP002967.1-201ENST00000624203 539 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 MIR137-201ENST00000385223 102 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 AL139156.1-201ENST00000412785 841 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 AC013470.3-201ENST00000420252 1194 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 XKRY-201ENST00000510392 1100 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 AP004247.3-201ENST00000608682 624 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 AC103710.1-201ENST00000610003 901 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.24□□□□□ -1.89
UBR1Q8IWV7 ZNF542P-204ENST00000482727 1305 ntBASIC3.24□□□□□ -1.89
UBR1Q8IWV7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UBR1Q8IWV7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.23□□□□□ -1.89
UBR1Q8IWV7 MTND5P28-201ENST00000438005 1594 ntBASIC3.23□□□□□ -1.89
UBR1Q8IWV7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
UBR1Q8IWV7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
UBR1Q8IWV7 RNA5SP129-201ENST00000410276 118 ntBASIC3.23□□□□□ -1.89
UBR1Q8IWV7 RNU2-6P-201ENST00000411404 190 ntBASIC3.23□□□□□ -1.89
UBR1Q8IWV7 PTP4A1P7-201ENST00000423476 514 ntBASIC3.23□□□□□ -1.89
UBR1Q8IWV7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.23□□□□□ -1.89
UBR1Q8IWV7 RPL21P71-201ENST00000465598 459 ntBASIC3.23□□□□□ -1.89
UBR1Q8IWV7 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.23□□□□□ -1.89
UBR1Q8IWV7 MIR3186-201ENST00000577404 85 ntBASIC3.23□□□□□ -1.89
UBR1Q8IWV7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.23□□□□□ -1.89
UBR1Q8IWV7 AC107871.2-201ENST00000612894 502 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms