Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC023347.2-201ENST00000433994 462 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.53□□□□□ -2
LRRC28Q86X40 Z96811.1-201ENST00000445880 108 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 NANOGNBP1-201ENST00000448444 480 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.53□□□□□ -2
LRRC28Q86X40 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.53□□□□□ -2
LRRC28Q86X40 AC103975.1-201ENST00000482506 483 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.53□□□□□ -2
LRRC28Q86X40 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.53□□□□□ -2
LRRC28Q86X40 MIR3605-201ENST00000583214 100 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 AL451007.1-201ENST00000595491 289 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 AP000787.2-201ENST00000604432 568 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.53□□□□□ -2
LRRC28Q86X40 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.53□□□□□ -2
LRRC28Q86X40 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.53□□□□□ -2
LRRC28Q86X40 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.53□□□□□ -2
LRRC28Q86X40 AC139713.2-210ENST00000641741 992 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
LRRC28Q86X40 MAPK10-266ENST00000641066 6555 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 RNU6-666P-201ENST00000363499 107 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LRRC28Q86X40 RNU6-891P-201ENST00000384280 111 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL353692.2-201ENST00000407054 335 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL591034.1-201ENST00000407447 340 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 RNA5SP492-201ENST00000411330 114 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL096701.2-201ENST00000416920 238 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL590399.6-201ENST00000446396 307 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL162389.1-201ENST00000449233 177 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AC112492.1-201ENST00000449607 712 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL445669.2-201ENST00000454425 421 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AP000705.1-201ENST00000454567 350 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AC090525.1-201ENST00000479116 478 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AADACP1-206ENST00000561502 1193 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL513477.2-201ENST00000607858 568 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 AC055764.2-201ENST00000610089 670 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 MIR7973-1-201ENST00000614683 76 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AL355493.4-201ENST00000618530 292 ntBASIC2.52□□□□□ -2.01
LRRC28Q86X40 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.52□□□□□ -2.01
LRRC28Q86X40 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
LRRC28Q86X40 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LRRC28Q86X40 RNU6-386P-201ENST00000362650 107 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 SNORD21-201ENST00000383953 95 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 RNU6-851P-201ENST00000384565 107 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 SNORA44-201ENST00000384584 132 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 RPL17P50-201ENST00000396131 546 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 AL139095.1-201ENST00000404326 391 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 RPL7P8-201ENST00000411964 730 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 HMGN2P35-201ENST00000412164 270 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 BX682237.1-201ENST00000415016 335 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 HSFY1P1-201ENST00000423928 1178 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 ST13P20-201ENST00000447996 1065 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 Z99714.1-201ENST00000450463 807 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC111000.2-201ENST00000507775 550 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC008676.3-201ENST00000521237 435 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC138761.3-201ENST00000579993 334 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC011471.1-201ENST00000585766 187 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 HSPE1P14-201ENST00000605812 302 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC011472.4-201ENST00000615848 491 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC107905.1-201ENST00000616204 426 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 ATP5A1P2-202ENST00000616464 443 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AC006111.3-201ENST00000622137 383 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LRRC28Q86X40 AP003122.5-201ENST00000527668 3766 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 ZNF807-201ENST00000328088 1707 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 AL359715.4-201ENST00000606629 1436 ntBASIC2.51□□□□□ -2.01
LRRC28Q86X40 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms