Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.66□□□□□ -2.14
CSMD3Q7Z407 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
CSMD3Q7Z407 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.14
CSMD3Q7Z407 OR11H5P-202ENST00000641612 1325 ntBASIC1.65□□□□□ -2.14
CSMD3Q7Z407 RNU6-14P-201ENST00000384630 106 ntBASIC1.65□□□□□ -2.14
CSMD3Q7Z407 SNORA79B-201ENST00000410557 148 ntBASIC1.65□□□□□ -2.14
CSMD3Q7Z407 Z82205.1-201ENST00000428456 297 ntBASIC1.65□□□□□ -2.14
CSMD3Q7Z407 MTCO3P21-201ENST00000430791 643 ntBASIC1.65□□□□□ -2.14
CSMD3Q7Z407 AL589765.3-201ENST00000446084 462 ntBASIC1.65□□□□□ -2.14
CSMD3Q7Z407 AK6P1-201ENST00000540219 478 ntBASIC1.65□□□□□ -2.14
CSMD3Q7Z407 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.65□□□□□ -2.14
CSMD3Q7Z407 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.65□□□□□ -2.14
CSMD3Q7Z407 WISP1-OT1-201ENST00000602893 642 ntBASIC1.65□□□□□ -2.14
CSMD3Q7Z407 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
CSMD3Q7Z407 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 RNA5SP502-201ENST00000362694 119 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 ELOCP13-201ENST00000443934 329 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 ST13P20-201ENST00000447996 1065 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 AC002553.2-201ENST00000453217 340 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 MTCO3P11-201ENST00000455103 774 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 ACTR6P1-201ENST00000514311 1104 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 AC004825.2-201ENST00000616634 455 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 THAP6-203ENST00000502620 582 ntTSL 3 BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 AC092436.3-201ENST00000511788 257 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 AC008083.2-201ENST00000546707 476 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 SNRPGP18-201ENST00000553000 214 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 AC026464.5-201ENST00000562497 722 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 AL450489.1-201ENST00000612071 468 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 CR589904.2-201ENST00000612533 440 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.65□□□□□ -2.15
CSMD3Q7Z407 AC016717.2-201ENST00000609089 5141 ntBASIC1.65□□□□□ -2.15
CSMD3Q7Z407 AC004925.1-201ENST00000624256 2706 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC009487.4-201ENST00000624969 3585 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 Y_RNA.112-201ENST00000363250 102 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 BTG3P1-201ENST00000435859 716 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 MRPL50P4-201ENST00000446432 475 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC126182.1-201ENST00000478134 357 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC011492.1-201ENST00000600023 315 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC128687.1-201ENST00000605304 619 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AL512646.1-201ENST00000269395 1077 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 RNU1-75P-201ENST00000347264 129 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 RNA5SP274-201ENST00000410484 108 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AMD1P2-201ENST00000412936 992 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC234781.4-201ENST00000419384 244 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC245517.2-201ENST00000442890 346 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC106872.2-201ENST00000494303 480 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 RNA5SP480-201ENST00000516840 109 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC025125.1-201ENST00000624743 1922 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 RN7SKP140-201ENST00000411196 284 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 VN1R17P-201ENST00000472048 1090 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 NDUFA5P6-201ENST00000542110 379 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AC091515.1-201ENST00000548110 679 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 AL451049.1-201ENST00000608672 497 ntBASIC1.64□□□□□ -2.15
CSMD3Q7Z407 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CSMD3Q7Z407 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 RNU1-87P-201ENST00000363727 170 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 RNU2-17P-201ENST00000410290 190 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 RPS15AP28-201ENST00000435088 386 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 AP001086.1-201ENST00000494882 321 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 AC021146.5-201ENST00000503544 545 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 TRMT112P2-201ENST00000512910 132 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 OR10D4P-201ENST00000525892 951 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CSMD3Q7Z407 RPS3AP4-201ENST00000555161 764 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 MTCYBP28-201ENST00000566728 1132 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 RPP40P2-201ENST00000603596 712 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 AL022099.1-201ENST00000604551 712 ntBASIC1.63□□□□□ -2.15
CSMD3Q7Z407 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms