Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AC108751.5-201ENST00000492880 1336 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AC093591.2-201ENST00000565254 3843 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AL359893.1-201ENST00000447628 1580 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 RNA5SP500-201ENST00000364486 119 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 Y_RNA.401-201ENST00000383965 117 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 RNU6-1127P-201ENST00000384580 107 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 RNU6-146P-201ENST00000384602 108 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 RNU6-1106P-201ENST00000390845 107 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 RNA5SP91-201ENST00000390902 119 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AL121834.1-202ENST00000404494 277 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 MIR1203-201ENST00000408812 85 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 RNU2-47P-201ENST00000410649 186 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC115283.1-201ENST00000427353 400 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC126120.1-201ENST00000431082 470 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 SNAP23P1-201ENST00000433229 246 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 ARL2BPP10-201ENST00000446487 531 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 RPS15AP27-201ENST00000449183 343 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 MTCO3P10-201ENST00000455912 772 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 RPL21P93-201ENST00000480465 489 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC105384.2-201ENST00000508433 640 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 RNU6-941P-201ENST00000516346 108 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 TRIM77BP-201ENST00000524985 1119 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC106782.4-201ENST00000568264 210 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 MIR4716-201ENST00000579628 84 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AL499605.1-201ENST00000604628 403 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC007938.3-201ENST00000604965 623 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC012409.4-201ENST00000612923 249 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC079776.5-201ENST00000641920 211 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 SAGE2P-201ENST00000420011 2126 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 AL137003.2-201ENST00000606924 2538 ntBASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LRFN4Q6PJG9 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 RNU6-249P-201ENST00000363016 102 ntBASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 Y_RNA.135-201ENST00000363439 95 ntBASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 MIR621-201ENST00000384919 96 ntBASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 MT-TC-201ENST00000387405 66 ntBASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 RNA5SP219-201ENST00000390940 113 ntBASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 RN7SKP279-201ENST00000411383 298 ntBASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 AL035660.1-201ENST00000422041 222 ntBASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 FABP7P2-201ENST00000429946 379 ntBASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.11□□□□□ -1.59
LRFN4Q6PJG9 AL353597.2-202ENST00000434901 373 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms