Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.29□□□□□ -1.56
SSRP1Q08945 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.29□□□□□ -1.56
SSRP1Q08945 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SSRP1Q08945 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSRP1Q08945 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSRP1Q08945 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SSRP1Q08945 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSRP1Q08945 AC011460.1-201ENST00000636268 1834 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSRP1Q08945 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SSRP1Q08945 Y_RNA.256-201ENST00000364594 104 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSRP1Q08945 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.28□□□□□ -1.56
SSRP1Q08945 MT-TC-201ENST00000387405 66 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 RNA5SP397-201ENST00000391323 118 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 SDHCP2-201ENST00000398565 501 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 MIR1277-201ENST00000408536 78 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 RNA5SP296-201ENST00000410523 111 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.28□□□□□ -1.56
SSRP1Q08945 RPS12P10-201ENST00000427031 377 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.28□□□□□ -1.56
SSRP1Q08945 UBE2V1P13-201ENST00000436983 439 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 RPL23AP93-201ENST00000440847 484 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AC112653.1-201ENST00000443851 386 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 Z95327.1-201ENST00000446082 482 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AL591623.2-201ENST00000449978 222 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.28□□□□□ -1.56
SSRP1Q08945 AC104308.1-201ENST00000454621 333 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AC023598.1-201ENST00000472521 361 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AC007182.2-201ENST00000489251 402 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 PRDX4P1-201ENST00000507189 574 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AC093824.1-201ENST00000508796 343 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AC009646.1-201ENST00000510455 318 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.28□□□□□ -1.56
SSRP1Q08945 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.28□□□□□ -1.56
SSRP1Q08945 AP003497.1-201ENST00000528472 562 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 OR5AN2P-201ENST00000534535 896 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSRP1Q08945 AC068446.3-201ENST00000555285 382 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AL161713.1-201ENST00000555538 145 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.28□□□□□ -1.56
SSRP1Q08945 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.28□□□□□ -1.56
SSRP1Q08945 AC006504.3-201ENST00000586818 523 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 UBE2L4-201ENST00000587688 464 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSRP1Q08945 AL355812.1-201ENST00000603215 216 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 MIR98-201ENST00000606724 119 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.28□□□□□ -1.56
SSRP1Q08945 AL158801.5-201ENST00000623123 465 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 AC091953.2-201ENST00000623979 160 ntBASIC5.28□□□□□ -1.56
SSRP1Q08945 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSRP1Q08945 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SSRP1Q08945 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.28□□□□□ -1.56
SSRP1Q08945 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSRP1Q08945 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSRP1Q08945 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSRP1Q08945 AC093591.2-201ENST00000565254 3843 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SSRP1Q08945 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSRP1Q08945 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSRP1Q08945 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSRP1Q08945 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SSRP1Q08945 Y_RNA.1-201ENST00000352915 104 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 RNU5E-1-201ENST00000362477 120 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SSRP1Q08945 SNORA70F-201ENST00000384142 135 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 GLULP6-201ENST00000399502 913 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 CCNG1P1-201ENST00000406783 885 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 MIR1250-201ENST00000408098 113 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.27□□□□□ -1.57
SSRP1Q08945 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.27□□□□□ -1.57
SSRP1Q08945 AC245052.5-201ENST00000416320 649 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.27□□□□□ -1.57
SSRP1Q08945 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.27□□□□□ -1.57
SSRP1Q08945 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SSRP1Q08945 AC002486.1-201ENST00000435098 391 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.27□□□□□ -1.57
SSRP1Q08945 WASF1P1-201ENST00000447560 1131 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 AL136380.1-201ENST00000447970 162 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.27□□□□□ -1.57
SSRP1Q08945 IFNWP4-201ENST00000453148 294 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 AC027673.1-201ENST00000456245 405 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 RPL38P1-201ENST00000460914 211 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.27□□□□□ -1.57
SSRP1Q08945 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.27□□□□□ -1.57
SSRP1Q08945 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.27□□□□□ -1.57
SSRP1Q08945 RNU6-27P-201ENST00000516146 107 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.27□□□□□ -1.57
SSRP1Q08945 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.27□□□□□ -1.57
SSRP1Q08945 MIR3118-1-201ENST00000581787 76 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 AC060771.1-201ENST00000582031 164 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.27□□□□□ -1.57
SSRP1Q08945 AC009902.3-201ENST00000606235 2172 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 MIR6780A-201ENST00000615089 68 ntBASIC5.27□□□□□ -1.57
SSRP1Q08945 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms