Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.91□□□□□ -1.78
LTBQ06643 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.91□□□□□ -1.78
LTBQ06643 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LTBQ06643 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.91□□□□□ -1.78
LTBQ06643 RNU6-583P-201ENST00000516012 92 ntBASIC3.91□□□□□ -1.78
LTBQ06643 AC008562.1-201ENST00000521763 330 ntBASIC3.91□□□□□ -1.78
LTBQ06643 DEFB131D-201ENST00000526803 184 ntBASIC3.91□□□□□ -1.78
LTBQ06643 AP002453.2-201ENST00000533503 320 ntBASIC3.91□□□□□ -1.78
LTBQ06643 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.91□□□□□ -1.78
LTBQ06643 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.91□□□□□ -1.78
LTBQ06643 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.91□□□□□ -1.78
LTBQ06643 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.91□□□□□ -1.78
LTBQ06643 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.91□□□□□ -1.78
LTBQ06643 AC008638.3-201ENST00000603341 463 ntBASIC3.91□□□□□ -1.78
LTBQ06643 AL031666.3-201ENST00000609320 1006 ntBASIC3.91□□□□□ -1.78
LTBQ06643 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.91□□□□□ -1.78
LTBQ06643 AC090517.2-201ENST00000614966 680 ntBASIC3.91□□□□□ -1.78
LTBQ06643 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LTBQ06643 AL021997.2-201ENST00000615674 271 ntBASIC3.91□□□□□ -1.78
LTBQ06643 AC091953.5-201ENST00000622919 233 ntBASIC3.91□□□□□ -1.78
LTBQ06643 AC019226.1-201ENST00000625666 515 ntBASIC3.91□□□□□ -1.78
LTBQ06643 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LTBQ06643 AC011266.1-201ENST00000624119 3569 ntBASIC3.91□□□□□ -1.78
LTBQ06643 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LTBQ06643 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LTBQ06643 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LTBQ06643 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LTBQ06643 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
LTBQ06643 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
LTBQ06643 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
LTBQ06643 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.9□□□□□ -1.78
LTBQ06643 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
LTBQ06643 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LTBQ06643 OR5P1P-201ENST00000299512 925 ntBASIC3.9□□□□□ -1.79
LTBQ06643 SNORA71.3-201ENST00000362582 128 ntBASIC3.9□□□□□ -1.79
LTBQ06643 RNU6-115P-201ENST00000364310 107 ntBASIC3.9□□□□□ -1.79
LTBQ06643 RNU6-1122P-201ENST00000384449 107 ntBASIC3.9□□□□□ -1.79
LTBQ06643 MIR200C-201ENST00000384980 68 ntBASIC3.9□□□□□ -1.79
LTBQ06643 MIR93-201ENST00000385024 80 ntBASIC3.9□□□□□ -1.79
LTBQ06643 MIR483-201ENST00000385070 76 ntBASIC3.9□□□□□ -1.79
LTBQ06643 Y_RNA.582-201ENST00000391023 95 ntBASIC3.9□□□□□ -1.79
LTBQ06643 PPIAP31-201ENST00000405422 495 ntBASIC3.9□□□□□ -1.79
LTBQ06643 AC109780.2-201ENST00000413467 845 ntBASIC3.9□□□□□ -1.79
LTBQ06643 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBQ06643 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.9□□□□□ -1.79
LTBQ06643 IPMKP1-201ENST00000425988 855 ntBASIC3.9□□□□□ -1.79
LTBQ06643 RPL7P2-201ENST00000427639 268 ntBASIC3.9□□□□□ -1.79
LTBQ06643 MTND1P2-201ENST00000430604 821 ntBASIC3.9□□□□□ -1.79
LTBQ06643 AC011998.1-201ENST00000433403 117 ntBASIC3.9□□□□□ -1.79
LTBQ06643 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.9□□□□□ -1.79
LTBQ06643 RPL12P46-201ENST00000436610 195 ntBASIC3.9□□□□□ -1.79
LTBQ06643 AL831737.1-201ENST00000441288 271 ntBASIC3.9□□□□□ -1.79
LTBQ06643 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBQ06643 AL671855.1-201ENST00000446875 1203 ntBASIC3.9□□□□□ -1.79
LTBQ06643 PAXBP1P1-201ENST00000449315 447 ntBASIC3.9□□□□□ -1.79
LTBQ06643 NDUFA5P7-201ENST00000452914 242 ntBASIC3.9□□□□□ -1.79
LTBQ06643 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.9□□□□□ -1.79
LTBQ06643 KLF3P2-201ENST00000465138 268 ntBASIC3.9□□□□□ -1.79
LTBQ06643 UQCRHP4-201ENST00000471686 272 ntBASIC3.9□□□□□ -1.79
LTBQ06643 OR4G11P-201ENST00000492842 939 ntBASIC3.9□□□□□ -1.79
LTBQ06643 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LTBQ06643 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LTBQ06643 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.9□□□□□ -1.79
LTBQ06643 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBQ06643 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.9□□□□□ -1.79
LTBQ06643 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBQ06643 CYCSP2-201ENST00000558168 301 ntBASIC3.9□□□□□ -1.79
LTBQ06643 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.9□□□□□ -1.79
LTBQ06643 AC124068.1-201ENST00000563131 678 ntBASIC3.9□□□□□ -1.79
LTBQ06643 MIR548S-201ENST00000581352 82 ntBASIC3.9□□□□□ -1.79
LTBQ06643 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.9□□□□□ -1.79
LTBQ06643 AC091488.1-201ENST00000604239 660 ntBASIC3.9□□□□□ -1.79
LTBQ06643 RNU6-88P-201ENST00000606801 100 ntBASIC3.9□□□□□ -1.79
LTBQ06643 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
LTBQ06643 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
LTBQ06643 AL008636.1-201ENST00000625038 1018 ntBASIC3.9□□□□□ -1.79
LTBQ06643 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.9□□□□□ -1.79
LTBQ06643 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LTBQ06643 OR5AK4P-201ENST00000635912 903 ntBASIC3.9□□□□□ -1.79
LTBQ06643 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LTBQ06643 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.9□□□□□ -1.79
LTBQ06643 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LTBQ06643 GDI2P1-201ENST00000429312 1336 ntBASIC3.9□□□□□ -1.79
LTBQ06643 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.9□□□□□ -1.79
LTBQ06643 AL592182.3-201ENST00000642132 3304 ntBASIC3.9□□□□□ -1.79
LTBQ06643 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LTBQ06643 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LTBQ06643 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LTBQ06643 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.89□□□□□ -1.79
LTBQ06643 RNU5E-5P-201ENST00000365379 116 ntBASIC3.89□□□□□ -1.79
LTBQ06643 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
LTBQ06643 Y_RNA.390-201ENST00000383932 102 ntBASIC3.89□□□□□ -1.79
LTBQ06643 MIR513A2-201ENST00000385249 127 ntBASIC3.89□□□□□ -1.79
LTBQ06643 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.89□□□□□ -1.79
LTBQ06643 RNU6-248P-201ENST00000410720 107 ntBASIC3.89□□□□□ -1.79
LTBQ06643 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.89□□□□□ -1.79
LTBQ06643 HMGN1P14-201ENST00000412459 517 ntBASIC3.89□□□□□ -1.79
LTBQ06643 RPL23AP26-201ENST00000412728 464 ntBASIC3.89□□□□□ -1.79
LTBQ06643 RPS23P10-201ENST00000416185 486 ntBASIC3.89□□□□□ -1.79
LTBQ06643 AC073136.2-201ENST00000417282 849 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms